Experiment: Fusidic 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06910 and AO356_06915 are separated by 269 nucleotides AO356_06915 and AO356_06920 overlap by 4 nucleotides AO356_06920 and AO356_06925 overlap by 70 nucleotides AO356_06925 and AO356_06930 are separated by 46 nucleotides
AO356_06910: AO356_06910 - long-chain fatty acid--CoA ligase, at 1,529,431 to 1,531,113
_06910
AO356_06915: AO356_06915 - glycosyl transferase, at 1,531,383 to 1,532,297
_06915
AO356_06920: AO356_06920 - hypothetical protein, at 1,532,294 to 1,532,686
_06920
AO356_06925: AO356_06925 - acetyltransferase, at 1,532,617 to 1,533,033
_06925
AO356_06930: AO356_06930 - lysine transporter LysE, at 1,533,080 to 1,533,709
_06930
Position (kb)
1531
1532
1533 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.419 kb on + strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.420 kb on - strand, within AO356_06910 at 1530.515 kb on + strand, within AO356_06910 at 1530.516 kb on - strand, within AO356_06910 at 1530.516 kb on - strand, within AO356_06910 at 1530.516 kb on - strand, within AO356_06910 at 1530.516 kb on - strand, within AO356_06910 at 1530.551 kb on + strand, within AO356_06910 at 1530.551 kb on + strand, within AO356_06910 at 1530.552 kb on - strand, within AO356_06910 at 1530.552 kb on - strand, within AO356_06910 at 1530.552 kb on - strand, within AO356_06910 at 1530.596 kb on + strand, within AO356_06910 at 1530.597 kb on - strand, within AO356_06910 at 1530.629 kb on + strand, within AO356_06910 at 1530.629 kb on + strand, within AO356_06910 at 1530.629 kb on + strand, within AO356_06910 at 1530.630 kb on - strand, within AO356_06910 at 1530.630 kb on - strand, within AO356_06910 at 1530.630 kb on - strand, within AO356_06910 at 1530.630 kb on - strand, within AO356_06910 at 1530.729 kb on - strand, within AO356_06910 at 1530.729 kb on - strand, within AO356_06910 at 1530.729 kb on - strand, within AO356_06910 at 1530.983 kb on + strand at 1530.984 kb on - strand at 1531.001 kb on + strand at 1531.002 kb on - strand at 1531.026 kb on - strand at 1531.068 kb on - strand at 1531.074 kb on - strand at 1531.096 kb on - strand at 1531.113 kb on + strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.114 kb on - strand at 1531.161 kb on + strand at 1531.161 kb on + strand at 1531.161 kb on + strand at 1531.161 kb on + strand at 1531.170 kb on + strand at 1531.170 kb on + strand at 1531.171 kb on - strand at 1531.172 kb on + strand at 1531.172 kb on + strand at 1531.173 kb on - strand at 1531.173 kb on - strand at 1531.173 kb on - strand at 1531.219 kb on - strand at 1531.226 kb on + strand at 1531.227 kb on - strand at 1531.227 kb on - strand at 1531.227 kb on - strand at 1531.227 kb on - strand at 1531.227 kb on - strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.300 kb on + strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.301 kb on - strand at 1531.316 kb on + strand at 1531.381 kb on + strand at 1531.381 kb on + strand at 1531.382 kb on - strand at 1531.458 kb on + strand at 1531.458 kb on + strand at 1531.458 kb on + strand at 1531.459 kb on - strand at 1531.459 kb on - strand at 1531.459 kb on - strand at 1531.473 kb on + strand at 1531.474 kb on - strand at 1531.593 kb on + strand, within AO356_06915 at 1531.608 kb on + strand, within AO356_06915 at 1531.608 kb on + strand, within AO356_06915 at 1531.608 kb on + strand, within AO356_06915 at 1531.608 kb on + strand, within AO356_06915 at 1531.608 kb on + strand, within AO356_06915 at 1531.674 kb on + strand, within AO356_06915 at 1531.674 kb on + strand, within AO356_06915 at 1531.674 kb on + strand, within AO356_06915 at 1531.674 kb on + strand, within AO356_06915 at 1531.674 kb on + strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.675 kb on - strand, within AO356_06915 at 1531.737 kb on + strand, within AO356_06915 at 1531.738 kb on - strand, within AO356_06915 at 1531.785 kb on + strand, within AO356_06915 at 1531.785 kb on + strand, within AO356_06915 at 1531.785 kb on + strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.786 kb on - strand, within AO356_06915 at 1531.844 kb on + strand, within AO356_06915 at 1531.844 kb on + strand, within AO356_06915 at 1531.844 kb on + strand, within AO356_06915 at 1531.844 kb on + strand, within AO356_06915 at 1531.844 kb on + strand, within AO356_06915 at 1531.845 kb on - strand, within AO356_06915 at 1531.845 kb on - strand, within AO356_06915 at 1531.845 kb on - strand, within AO356_06915 at 1531.900 kb on - strand, within AO356_06915 at 1531.932 kb on + strand, within AO356_06915 at 1531.945 kb on + strand, within AO356_06915 at 1531.945 kb on + strand, within AO356_06915 at 1531.946 kb on - strand, within AO356_06915 at 1531.946 kb on - strand, within AO356_06915 at 1531.992 kb on + strand, within AO356_06915 at 1532.061 kb on + strand, within AO356_06915 at 1532.061 kb on + strand, within AO356_06915 at 1532.061 kb on + strand, within AO356_06915 at 1532.136 kb on - strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.163 kb on + strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.164 kb on - strand, within AO356_06915 at 1532.400 kb on - strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.420 kb on + strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.421 kb on - strand, within AO356_06920 at 1532.477 kb on + strand, within AO356_06920 at 1532.477 kb on + strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.478 kb on - strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.479 kb on + strand, within AO356_06920 at 1532.480 kb on - strand, within AO356_06920 at 1533.243 kb on + strand, within AO356_06930 at 1533.243 kb on + strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.244 kb on - strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930 at 1533.277 kb on + strand, within AO356_06930
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.1 mg/ml remove 1,530,419 + AO356_06910 0.59 +0.3 1,530,419 + AO356_06910 0.59 -0.1 1,530,419 + AO356_06910 0.59 -0.4 1,530,419 + AO356_06910 0.59 +0.4 1,530,419 + AO356_06910 0.59 -0.2 1,530,419 + AO356_06910 0.59 -0.2 1,530,419 + AO356_06910 0.59 -0.4 1,530,419 + AO356_06910 0.59 -0.6 1,530,419 + AO356_06910 0.59 +0.4 1,530,419 + AO356_06910 0.59 +0.1 1,530,420 - AO356_06910 0.59 -0.9 1,530,420 - AO356_06910 0.59 -1.2 1,530,420 - AO356_06910 0.59 +0.1 1,530,420 - AO356_06910 0.59 +0.5 1,530,420 - AO356_06910 0.59 +1.1 1,530,420 - AO356_06910 0.59 -0.6 1,530,420 - AO356_06910 0.59 -0.1 1,530,420 - AO356_06910 0.59 -1.1 1,530,420 - AO356_06910 0.59 +0.1 1,530,515 + AO356_06910 0.64 +0.9 1,530,516 - AO356_06910 0.64 +0.6 1,530,516 - AO356_06910 0.64 +0.8 1,530,516 - AO356_06910 0.64 +0.7 1,530,516 - AO356_06910 0.64 +0.4 1,530,551 + AO356_06910 0.67 -1.6 1,530,551 + AO356_06910 0.67 +0.3 1,530,552 - AO356_06910 0.67 -0.3 1,530,552 - AO356_06910 0.67 +0.1 1,530,552 - AO356_06910 0.67 +0.1 1,530,596 + AO356_06910 0.69 +0.5 1,530,597 - AO356_06910 0.69 -0.5 1,530,629 + AO356_06910 0.71 -0.4 1,530,629 + AO356_06910 0.71 +0.4 1,530,629 + AO356_06910 0.71 -0.1 1,530,630 - AO356_06910 0.71 -0.0 1,530,630 - AO356_06910 0.71 +0.9 1,530,630 - AO356_06910 0.71 -0.4 1,530,630 - AO356_06910 0.71 +0.0 1,530,729 - AO356_06910 0.77 -0.3 1,530,729 - AO356_06910 0.77 -0.9 1,530,729 - AO356_06910 0.77 -0.9 1,530,983 + +0.1 1,530,984 - +0.2 1,531,001 + +0.4 1,531,002 - +0.4 1,531,026 - -1.0 1,531,068 - +0.3 1,531,074 - +1.3 1,531,096 - -0.7 1,531,113 + -0.3 1,531,114 - +0.1 1,531,114 - +0.8 1,531,114 - +1.6 1,531,114 - +0.0 1,531,114 - +0.5 1,531,114 - -0.4 1,531,114 - -0.2 1,531,114 - +0.3 1,531,114 - -0.1 1,531,114 - +1.7 1,531,114 - -0.7 1,531,161 + +1.5 1,531,161 + -0.8 1,531,161 + -0.9 1,531,161 + -0.3 1,531,170 + -0.3 1,531,170 + -0.2 1,531,171 - -0.1 1,531,172 + +0.4 1,531,172 + -0.1 1,531,173 - -0.5 1,531,173 - -0.2 1,531,173 - +0.2 1,531,219 - -0.2 1,531,226 + +0.8 1,531,227 - -1.4 1,531,227 - -0.4 1,531,227 - +0.2 1,531,227 - +0.1 1,531,227 - -0.1 1,531,300 + -0.3 1,531,300 + -1.3 1,531,300 + +0.2 1,531,300 + -0.5 1,531,300 + +0.1 1,531,300 + -0.4 1,531,300 + -1.0 1,531,300 + +0.4 1,531,300 + +0.6 1,531,300 + -2.8 1,531,300 + +0.1 1,531,300 + -0.9 1,531,300 + -0.1 1,531,301 - -0.3 1,531,301 - -1.0 1,531,301 - +0.2 1,531,301 - +0.7 1,531,301 - +0.0 1,531,301 - -0.3 1,531,301 - +0.8 1,531,301 - +1.0 1,531,301 - -0.3 1,531,301 - -0.4 1,531,301 - +0.6 1,531,316 + -0.3 1,531,381 + +0.4 1,531,381 + +0.4 1,531,382 - +0.3 1,531,458 + +0.6 1,531,458 + +0.0 1,531,458 + +0.3 1,531,459 - -0.1 1,531,459 - -0.6 1,531,459 - +0.9 1,531,473 + +0.3 1,531,474 - +0.9 1,531,593 + AO356_06915 0.23 +0.6 1,531,608 + AO356_06915 0.25 -0.4 1,531,608 + AO356_06915 0.25 +0.4 1,531,608 + AO356_06915 0.25 -1.2 1,531,608 + AO356_06915 0.25 -1.1 1,531,608 + AO356_06915 0.25 +0.2 1,531,674 + AO356_06915 0.32 -0.8 1,531,674 + AO356_06915 0.32 +0.6 1,531,674 + AO356_06915 0.32 +0.3 1,531,674 + AO356_06915 0.32 +0.3 1,531,674 + AO356_06915 0.32 -0.7 1,531,675 - AO356_06915 0.32 +0.2 1,531,675 - AO356_06915 0.32 +0.1 1,531,675 - AO356_06915 0.32 +2.0 1,531,675 - AO356_06915 0.32 -0.3 1,531,675 - AO356_06915 0.32 +0.4 1,531,675 - AO356_06915 0.32 +0.1 1,531,675 - AO356_06915 0.32 +0.1 1,531,675 - AO356_06915 0.32 +0.7 1,531,675 - AO356_06915 0.32 +0.3 1,531,737 + AO356_06915 0.39 +0.8 1,531,738 - AO356_06915 0.39 +0.6 1,531,785 + AO356_06915 0.44 +0.7 1,531,785 + AO356_06915 0.44 +0.7 1,531,785 + AO356_06915 0.44 +0.9 1,531,786 - AO356_06915 0.44 +1.5 1,531,786 - AO356_06915 0.44 +0.3 1,531,786 - AO356_06915 0.44 +0.3 1,531,786 - AO356_06915 0.44 +0.1 1,531,786 - AO356_06915 0.44 -0.3 1,531,786 - AO356_06915 0.44 +0.3 1,531,786 - AO356_06915 0.44 +0.4 1,531,844 + AO356_06915 0.50 +0.8 1,531,844 + AO356_06915 0.50 +0.1 1,531,844 + AO356_06915 0.50 +0.4 1,531,844 + AO356_06915 0.50 +0.3 1,531,844 + AO356_06915 0.50 -0.4 1,531,845 - AO356_06915 0.50 -0.1 1,531,845 - AO356_06915 0.50 +0.4 1,531,845 - AO356_06915 0.50 +0.6 1,531,900 - AO356_06915 0.57 +0.2 1,531,932 + AO356_06915 0.60 -0.3 1,531,945 + AO356_06915 0.61 +0.2 1,531,945 + AO356_06915 0.61 +0.1 1,531,946 - AO356_06915 0.62 -0.2 1,531,946 - AO356_06915 0.62 +0.3 1,531,992 + AO356_06915 0.67 +0.6 1,532,061 + AO356_06915 0.74 +0.6 1,532,061 + AO356_06915 0.74 -0.4 1,532,061 + AO356_06915 0.74 +0.1 1,532,136 - AO356_06915 0.82 +1.5 1,532,163 + AO356_06915 0.85 +0.4 1,532,163 + AO356_06915 0.85 +0.7 1,532,163 + AO356_06915 0.85 -0.4 1,532,163 + AO356_06915 0.85 -0.6 1,532,164 - AO356_06915 0.85 +0.9 1,532,164 - AO356_06915 0.85 -1.0 1,532,164 - AO356_06915 0.85 -0.9 1,532,164 - AO356_06915 0.85 +0.0 1,532,400 - AO356_06920 0.27 -0.2 1,532,420 + AO356_06920 0.32 +0.4 1,532,420 + AO356_06920 0.32 +0.6 1,532,420 + AO356_06920 0.32 +0.4 1,532,420 + AO356_06920 0.32 -0.6 1,532,420 + AO356_06920 0.32 +0.1 1,532,420 + AO356_06920 0.32 +0.1 1,532,420 + AO356_06920 0.32 +0.2 1,532,420 + AO356_06920 0.32 -0.3 1,532,421 - AO356_06920 0.32 +0.3 1,532,421 - AO356_06920 0.32 -0.1 1,532,421 - AO356_06920 0.32 -1.3 1,532,421 - AO356_06920 0.32 -1.3 1,532,421 - AO356_06920 0.32 -0.5 1,532,421 - AO356_06920 0.32 -1.8 1,532,421 - AO356_06920 0.32 -0.3 1,532,421 - AO356_06920 0.32 +0.4 1,532,421 - AO356_06920 0.32 -0.0 1,532,477 + AO356_06920 0.47 +0.9 1,532,477 + AO356_06920 0.47 -0.7 1,532,478 - AO356_06920 0.47 -0.3 1,532,478 - AO356_06920 0.47 +0.8 1,532,478 - AO356_06920 0.47 +0.8 1,532,478 - AO356_06920 0.47 +0.9 1,532,479 + AO356_06920 0.47 +0.6 1,532,479 + AO356_06920 0.47 +0.1 1,532,479 + AO356_06920 0.47 +0.6 1,532,480 - AO356_06920 0.47 +1.1 1,533,243 + AO356_06930 0.26 +0.2 1,533,243 + AO356_06930 0.26 -0.9 1,533,244 - AO356_06930 0.26 -0.6 1,533,244 - AO356_06930 0.26 +0.3 1,533,277 + AO356_06930 0.31 -0.0 1,533,277 + AO356_06930 0.31 -0.1
Or see this region's nucleotide sequence