Experiment: Fusidic 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01745 and AO356_01750 are separated by 107 nucleotides AO356_01750 and AO356_01755 are separated by 93 nucleotides
AO356_01745: AO356_01745 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 394,376 to 395,659
_01745
AO356_01750: AO356_01750 - ATP-dependent Clp protease proteolytic subunit, at 395,767 to 396,408
_01750
AO356_01755: AO356_01755 - trigger factor, at 396,502 to 397,812
_01755
Position (kb)
395
396
397 Strain fitness (log2 ratio)
-2
-1
0
1 at 394.836 kb on - strand, within AO356_01745 at 394.836 kb on - strand, within AO356_01745 at 394.836 kb on - strand, within AO356_01745 at 395.109 kb on + strand, within AO356_01745 at 395.110 kb on - strand, within AO356_01745 at 395.110 kb on - strand, within AO356_01745 at 395.110 kb on - strand, within AO356_01745 at 395.192 kb on + strand, within AO356_01745 at 395.192 kb on + strand, within AO356_01745 at 395.193 kb on - strand, within AO356_01745 at 395.193 kb on - strand, within AO356_01745 at 395.197 kb on - strand, within AO356_01745 at 395.370 kb on + strand, within AO356_01745 at 395.371 kb on - strand, within AO356_01745 at 395.428 kb on - strand, within AO356_01745 at 395.616 kb on + strand at 395.617 kb on - strand at 395.617 kb on - strand at 395.768 kb on + strand at 395.768 kb on + strand at 395.769 kb on - strand at 396.129 kb on - strand, within AO356_01750 at 396.173 kb on + strand, within AO356_01750 at 396.173 kb on + strand, within AO356_01750 at 396.173 kb on + strand, within AO356_01750 at 396.245 kb on + strand, within AO356_01750 at 396.246 kb on - strand, within AO356_01750 at 396.246 kb on - strand, within AO356_01750 at 396.299 kb on + strand, within AO356_01750 at 396.299 kb on + strand, within AO356_01750 at 396.299 kb on + strand, within AO356_01750 at 396.300 kb on - strand, within AO356_01750 at 396.429 kb on + strand at 396.430 kb on - strand at 396.433 kb on + strand at 396.433 kb on + strand at 396.434 kb on - strand at 396.434 kb on - strand at 396.434 kb on - strand at 396.434 kb on - strand at 396.445 kb on - strand at 396.450 kb on + strand at 396.450 kb on + strand at 396.483 kb on - strand at 396.483 kb on - strand at 396.483 kb on - strand at 396.571 kb on - strand at 396.589 kb on - strand at 396.651 kb on - strand, within AO356_01755 at 396.651 kb on - strand, within AO356_01755 at 397.152 kb on - strand, within AO356_01755
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.1 mg/ml remove 394,836 - AO356_01745 0.36 -1.0 394,836 - AO356_01745 0.36 -1.5 394,836 - AO356_01745 0.36 -1.0 395,109 + AO356_01745 0.57 +0.6 395,110 - AO356_01745 0.57 -0.0 395,110 - AO356_01745 0.57 -0.5 395,110 - AO356_01745 0.57 -2.5 395,192 + AO356_01745 0.64 +0.8 395,192 + AO356_01745 0.64 +0.8 395,193 - AO356_01745 0.64 +0.1 395,193 - AO356_01745 0.64 -0.1 395,197 - AO356_01745 0.64 -0.7 395,370 + AO356_01745 0.77 -0.2 395,371 - AO356_01745 0.77 -0.7 395,428 - AO356_01745 0.82 +1.3 395,616 + -1.8 395,617 - -0.3 395,617 - -1.0 395,768 + -0.7 395,768 + -0.3 395,769 - -0.9 396,129 - AO356_01750 0.56 -1.7 396,173 + AO356_01750 0.63 -2.1 396,173 + AO356_01750 0.63 -1.2 396,173 + AO356_01750 0.63 -2.2 396,245 + AO356_01750 0.74 -0.4 396,246 - AO356_01750 0.75 -1.9 396,246 - AO356_01750 0.75 -0.2 396,299 + AO356_01750 0.83 -0.0 396,299 + AO356_01750 0.83 -1.5 396,299 + AO356_01750 0.83 -1.1 396,300 - AO356_01750 0.83 -1.0 396,429 + -1.0 396,430 - -0.0 396,433 + -1.2 396,433 + +1.5 396,434 - +0.5 396,434 - -0.7 396,434 - -0.4 396,434 - +0.1 396,445 - +0.7 396,450 + +0.2 396,450 + -0.0 396,483 - -0.8 396,483 - -0.9 396,483 - -0.7 396,571 - +0.2 396,589 - +0.4 396,651 - AO356_01755 0.11 -2.1 396,651 - AO356_01755 0.11 -1.5 397,152 - AO356_01755 0.50 -2.7
Or see this region's nucleotide sequence