Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2789

Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Doxycycline hyclate 0.003 mg/ml
3,530,797	+		DvMF_2788	0.88	+0.2
3,530,859	-				-2.7
3,530,867	-				-0.8
3,531,092	-				-0.9
3,531,374	+				+0.1
3,531,441	+				-1.2
3,531,647	+				-0.1
3,531,720	-		DvMF_2789	0.13	-0.7
3,531,744	-		DvMF_2789	0.15	+0.2
3,531,744	-		DvMF_2789	0.15	+0.1
3,531,826	-		DvMF_2789	0.20	-1.7
3,531,879	+		DvMF_2789	0.24	+0.6
3,531,897	-		DvMF_2789	0.25	+0.3
3,532,224	-		DvMF_2789	0.49	+0.7
3,532,290	+		DvMF_2789	0.53	+0.5
3,532,439	-		DvMF_2789	0.64	-0.3
3,532,471	-		DvMF_2789	0.66	+0.2
3,532,471	-		DvMF_2789	0.66	-0.2
3,532,774	-		DvMF_2789	0.87	+0.6
3,532,854	+				-0.7
3,532,929	+				-0.3
3,532,936	-				+0.0
3,532,937	-				+0.5
3,533,026	-				-0.6
3,533,343	+				-1.4
3,533,417	-				-0.7
3,533,500	+				-0.9
3,533,500	+				-0.9
3,533,621	+		DvMF_2790	0.19	-0.2
3,533,691	+		DvMF_2790	0.26	-0.6
3,533,691	+		DvMF_2790	0.26	-0.3
3,533,699	-		DvMF_2790	0.27	-1.3
3,533,906	+		DvMF_2790	0.50	-1.1