Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2712
Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,431,849 | + | -0.9 | |||
3,431,857 | - | +0.1 | |||
3,432,116 | - | +1.5 | |||
3,432,169 | - | DvMF_2711 | 0.21 | -0.6 | |
3,432,304 | - | DvMF_2711 | 0.49 | -0.8 | |
3,432,339 | - | DvMF_2711 | 0.57 | +0.3 | |
3,432,608 | + | -0.3 | |||
3,432,790 | + | DvMF_2712 | 0.12 | -0.2 | |
3,432,892 | - | DvMF_2712 | 0.17 | -0.4 | |
3,433,192 | + | DvMF_2712 | 0.32 | +0.0 | |
3,433,243 | + | DvMF_2712 | 0.34 | -0.2 | |
3,433,532 | - | DvMF_2712 | 0.49 | -0.4 | |
3,433,561 | + | DvMF_2712 | 0.50 | -0.4 | |
3,433,604 | + | DvMF_2712 | 0.52 | +0.0 | |
3,433,954 | - | DvMF_2712 | 0.69 | -1.0 | |
3,434,228 | + | DvMF_2712 | 0.83 | -0.6 | |
3,434,345 | - | DvMF_2712 | 0.89 | -1.2 | |
3,434,364 | + | DvMF_2712 | 0.90 | -1.0 | |
3,434,453 | - | -0.5 | |||
3,434,581 | + | -0.2 | |||
3,435,007 | - | DvMF_2713 | 0.13 | -0.6 | |
3,435,040 | - | DvMF_2713 | 0.15 | +0.4 | |
3,435,126 | + | DvMF_2713 | 0.19 | -1.3 |
Or see this region's nucleotide sequence