Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2198

Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Doxycycline hyclate 0.003 mg/ml
2,746,885	+		DvMF_2197	0.45	+0.5
2,747,023	+		DvMF_2197	0.58	-0.4
2,747,109	-		DvMF_2197	0.66	+0.4
2,747,543	-				+0.9
2,747,582	+				+0.3
2,747,886	-				-0.0
2,747,902	+				+0.1
2,747,923	-				-0.6
2,747,986	+				-0.3
2,748,268	-		DvMF_2198	0.18	-1.0
2,748,279	-		DvMF_2198	0.18	+1.1
2,748,325	-		DvMF_2198	0.19	-2.8
2,748,523	-		DvMF_2198	0.25	-0.4
2,748,755	-		DvMF_2198	0.31	-0.4
2,748,790	+		DvMF_2198	0.32	-1.1
2,748,790	+		DvMF_2198	0.32	-0.6
2,749,384	-		DvMF_2198	0.49	-0.5
2,749,402	+		DvMF_2198	0.49	-0.5
2,749,460	+		DvMF_2198	0.51	-0.7
2,749,465	+		DvMF_2198	0.51	-0.5
2,749,468	-		DvMF_2198	0.51	-1.7
2,749,698	+		DvMF_2198	0.57	-0.7
2,750,012	+		DvMF_2198	0.66	-1.0
2,750,203	-		DvMF_2198	0.71	-3.6
2,750,286	-		DvMF_2198	0.74	-1.3
2,750,391	+		DvMF_2198	0.77	-0.2
2,750,524	-		DvMF_2198	0.80	-0.7
2,750,628	+		DvMF_2198	0.83	-1.0
2,750,740	+		DvMF_2198	0.86	-0.6
2,750,792	+		DvMF_2198	0.88	+0.4
2,750,808	-		DvMF_2198	0.88	-0.4
2,750,816	+		DvMF_2198	0.88	-1.2
2,750,860	+		DvMF_2198	0.90	-0.5
2,750,873	+				+0.4
2,750,881	-				-0.8
2,750,991	+				-3.8
2,751,048	+				-0.8
2,751,065	+				-0.9
2,751,185	-				-1.0
2,751,242	-				-0.3
2,751,322	-				-0.6
2,751,327	-				+0.1
2,751,573	-				-0.9
2,751,573	-				-1.1
2,751,739	-		DvMF_2199	0.38	-1.4
2,751,784	-		DvMF_2199	0.45	+0.1
2,751,971	-		DvMF_2199	0.77	-0.9
2,752,022	+		DvMF_2199	0.85	-0.6
2,752,066	+				-0.6
2,752,184	+				-0.9
2,752,221	-				-1.2