Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1200
Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Doxycycline hyclate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,477,519 | - | DvMF_1199 | 0.40 | -0.1 | |
1,477,752 | - | DvMF_1199 | 0.58 | +0.3 | |
1,477,800 | - | DvMF_1199 | 0.61 | -1.4 | |
1,477,819 | + | DvMF_1199 | 0.63 | +1.5 | |
1,478,004 | - | DvMF_1199 | 0.77 | -1.2 | |
1,478,140 | - | DvMF_1199 | 0.88 | -1.0 | |
1,478,236 | - | -0.7 | |||
1,478,326 | + | -1.0 | |||
1,478,480 | - | -0.1 | |||
1,478,522 | + | -0.3 | |||
1,478,740 | + | DvMF_1200 | 0.25 | -1.3 | |
1,478,950 | + | DvMF_1200 | 0.43 | -4.1 | |
1,479,279 | + | DvMF_1200 | 0.72 | +0.1 | |
1,479,472 | - | DvMF_1200 | 0.89 | +1.6 | |
1,480,117 | + | DvMF_1201 | 0.43 | -0.5 | |
1,480,274 | + | DvMF_1201 | 0.61 | -0.8 | |
1,480,415 | - | DvMF_1201 | 0.77 | -1.3 | |
1,480,459 | - | DvMF_1201 | 0.82 | -0.6 | |
1,480,583 | + | -1.2 |
Or see this region's nucleotide sequence