Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0694 and DvMF_0695 are separated by 177 nucleotides DvMF_0695 and DvMF_0696 are separated by 20 nucleotides DvMF_0696 and DvMF_0697 overlap by 4 nucleotides DvMF_0697 and DvMF_0698 overlap by 1 nucleotides
DvMF_0694: DvMF_0694 - protein of unknown function DUF1555 (RefSeq), at 841,599 to 842,453
_0694
DvMF_0695: DvMF_0695 - CAAX prenyl protease-related protein (RefSeq), at 842,631 to 843,341
_0695
DvMF_0696: DvMF_0696 - secretion protein HlyD family protein (RefSeq), at 843,362 to 844,423
_0696
DvMF_0697: DvMF_0697 - ABC transporter related (RefSeq), at 844,420 to 845,118
_0697
DvMF_0698: DvMF_0698 - protein of unknown function DUF214 (RefSeq), at 845,118 to 846,248
_0698
Position (kb) 843
844
845 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 842.432 kb on - strand at 842.448 kb on + strand at 842.711 kb on + strand, within DvMF_0695 at 842.750 kb on - strand, within DvMF_0695 at 842.786 kb on + strand, within DvMF_0695 at 842.849 kb on - strand, within DvMF_0695 at 843.005 kb on - strand, within DvMF_0695 at 843.188 kb on - strand, within DvMF_0695 at 843.486 kb on - strand, within DvMF_0696 at 843.749 kb on + strand, within DvMF_0696 at 843.767 kb on - strand, within DvMF_0696 at 843.769 kb on + strand, within DvMF_0696 at 843.769 kb on + strand, within DvMF_0696 at 843.919 kb on + strand, within DvMF_0696 at 843.945 kb on - strand, within DvMF_0696 at 844.237 kb on - strand, within DvMF_0696 at 844.248 kb on - strand, within DvMF_0696 at 844.254 kb on + strand, within DvMF_0696 at 844.262 kb on - strand, within DvMF_0696 at 844.327 kb on + strand at 844.660 kb on - strand, within DvMF_0697
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Doxycycline hyclate 0.003 mg/ml remove 842,432 - +0.3 842,448 + +0.9 842,711 + DvMF_0695 0.11 -0.4 842,750 - DvMF_0695 0.17 -1.9 842,786 + DvMF_0695 0.22 -0.5 842,849 - DvMF_0695 0.31 -0.4 843,005 - DvMF_0695 0.53 -0.5 843,188 - DvMF_0695 0.78 -2.2 843,486 - DvMF_0696 0.12 -0.7 843,749 + DvMF_0696 0.36 -3.0 843,767 - DvMF_0696 0.38 -0.8 843,769 + DvMF_0696 0.38 -0.2 843,769 + DvMF_0696 0.38 -1.2 843,919 + DvMF_0696 0.52 -2.2 843,945 - DvMF_0696 0.55 -0.6 844,237 - DvMF_0696 0.82 -0.3 844,248 - DvMF_0696 0.83 -0.7 844,254 + DvMF_0696 0.84 -0.8 844,262 - DvMF_0696 0.85 -1.4 844,327 + -0.9 844,660 - DvMF_0697 0.34 -0.6
Or see this region's nucleotide sequence