Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0544

Experiment: MoYLS4 with Doxycycline hyclate 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Doxycycline hyclate 0.003 mg/ml
639,885	+		DvMF_0543	0.66	-0.1
639,939	-		DvMF_0543	0.69	-0.6
639,954	-		DvMF_0543	0.70	+0.4
640,185	+		DvMF_0543	0.82	-1.0
640,196	+		DvMF_0543	0.82	-2.1
640,469	+				-2.8
640,534	+				+0.3
640,544	+				-1.1
640,544	+				-1.9
640,621	+				-0.0
640,801	+				-0.5
640,809	-				-0.4
640,886	+				-0.9
640,900	-				-0.6
641,064	+		DvMF_0544	0.26	-0.7
641,106	-		DvMF_0544	0.31	-1.1
641,341	-		DvMF_0544	0.59	-2.0
641,346	-		DvMF_0544	0.59	-0.7
641,573	-		DvMF_0544	0.86	+0.5
641,584	-		DvMF_0544	0.87	-0.3
641,584	-		DvMF_0544	0.87	-1.8
641,647	-				-1.2
641,840	+		DvMF_0545	0.14	+0.7
641,933	-		DvMF_0545	0.22	-1.3
641,989	+		DvMF_0545	0.27	-0.5
642,033	-		DvMF_0545	0.31	+1.1
642,180	-		DvMF_0545	0.44	-0.7
642,588	-		DvMF_0545	0.81	+0.2
642,598	+		DvMF_0545	0.82	-0.1