Experiment: MoLS4 with L-Serine (N), without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1271 and gspE are separated by 3 nucleotides gspE and DVU1273 are separated by 288 nucleotides
DVU1271: DVU1271 - general secretion pathway protein F, putative (TIGR), at 1,361,119 to 1,362,345
DVU1271
DVU1272: gspE - general secretion pathway protein E, putative (TIGR), at 1,362,349 to 1,364,070
gspE
DVU1273: DVU1273 - bacterial type II/III secretion system protein (TIGR), at 1,364,359 to 1,365,933
DVU1273
Position (kb)
1362
1363
1364
1365 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1361.373 kb on - strand, within DVU1271 at 1361.436 kb on - strand, within DVU1271 at 1361.450 kb on + strand, within DVU1271 at 1361.489 kb on - strand, within DVU1271 at 1361.520 kb on - strand, within DVU1271 at 1361.587 kb on - strand, within DVU1271 at 1361.661 kb on + strand, within DVU1271 at 1361.822 kb on + strand, within DVU1271 at 1361.825 kb on - strand, within DVU1271 at 1361.830 kb on - strand, within DVU1271 at 1361.890 kb on + strand, within DVU1271 at 1361.898 kb on - strand, within DVU1271 at 1361.905 kb on - strand, within DVU1271 at 1361.911 kb on + strand, within DVU1271 at 1361.959 kb on - strand, within DVU1271 at 1361.991 kb on + strand, within DVU1271 at 1361.994 kb on - strand, within DVU1271 at 1362.089 kb on - strand, within DVU1271 at 1362.113 kb on + strand, within DVU1271 at 1362.174 kb on + strand, within DVU1271 at 1362.228 kb on + strand at 1362.274 kb on - strand at 1362.410 kb on - strand at 1362.439 kb on + strand at 1362.439 kb on + strand at 1362.447 kb on - strand at 1362.495 kb on + strand at 1362.538 kb on - strand, within gspE at 1362.548 kb on - strand, within gspE at 1362.598 kb on - strand, within gspE at 1362.599 kb on - strand, within gspE at 1362.613 kb on + strand, within gspE at 1362.807 kb on + strand, within gspE at 1362.861 kb on + strand, within gspE at 1362.896 kb on - strand, within gspE at 1362.940 kb on + strand, within gspE at 1362.948 kb on - strand, within gspE at 1363.005 kb on + strand, within gspE at 1363.045 kb on + strand, within gspE at 1363.089 kb on + strand, within gspE at 1363.186 kb on - strand, within gspE at 1363.186 kb on - strand, within gspE at 1363.215 kb on - strand, within gspE at 1363.383 kb on + strand, within gspE at 1363.428 kb on + strand, within gspE at 1363.443 kb on - strand, within gspE at 1363.450 kb on + strand, within gspE at 1363.458 kb on - strand, within gspE at 1363.499 kb on - strand, within gspE at 1363.504 kb on - strand, within gspE at 1363.527 kb on - strand, within gspE at 1363.655 kb on + strand, within gspE at 1363.693 kb on - strand, within gspE at 1363.768 kb on - strand, within gspE at 1363.805 kb on + strand, within gspE at 1363.813 kb on + strand, within gspE at 1363.821 kb on - strand, within gspE at 1363.897 kb on - strand, within gspE at 1363.959 kb on + strand at 1363.965 kb on + strand at 1363.995 kb on + strand at 1363.995 kb on + strand at 1364.008 kb on - strand at 1364.008 kb on - strand at 1364.078 kb on - strand at 1364.108 kb on + strand at 1364.147 kb on - strand at 1364.158 kb on + strand at 1364.230 kb on + strand at 1364.297 kb on + strand at 1364.394 kb on - strand at 1364.421 kb on + strand at 1364.455 kb on - strand at 1364.507 kb on - strand at 1364.638 kb on - strand, within DVU1273 at 1364.647 kb on - strand, within DVU1273 at 1364.682 kb on - strand, within DVU1273 at 1364.858 kb on + strand, within DVU1273 at 1364.881 kb on - strand, within DVU1273 at 1365.000 kb on - strand, within DVU1273 at 1365.014 kb on + strand, within DVU1273 at 1365.028 kb on + strand, within DVU1273
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without Molybdate/Tungstate remove 1,361,373 - DVU1271 0.21 +0.0 1,361,436 - DVU1271 0.26 +0.4 1,361,450 + DVU1271 0.27 +3.8 1,361,489 - DVU1271 0.30 +0.3 1,361,520 - DVU1271 0.33 -0.2 1,361,587 - DVU1271 0.38 +0.8 1,361,661 + DVU1271 0.44 +0.4 1,361,822 + DVU1271 0.57 +0.4 1,361,825 - DVU1271 0.58 -0.3 1,361,830 - DVU1271 0.58 +1.2 1,361,890 + DVU1271 0.63 +0.3 1,361,898 - DVU1271 0.63 +0.6 1,361,905 - DVU1271 0.64 +0.4 1,361,911 + DVU1271 0.65 +1.7 1,361,959 - DVU1271 0.68 +1.4 1,361,991 + DVU1271 0.71 -0.2 1,361,994 - DVU1271 0.71 +1.3 1,362,089 - DVU1271 0.79 +1.0 1,362,113 + DVU1271 0.81 +0.4 1,362,174 + DVU1271 0.86 +0.3 1,362,228 + +0.1 1,362,274 - +0.9 1,362,410 - +0.2 1,362,439 + +0.7 1,362,439 + +0.1 1,362,447 - +0.8 1,362,495 + +0.4 1,362,538 - gspE DVU1272 0.11 -0.3 1,362,548 - gspE DVU1272 0.12 +0.0 1,362,598 - gspE DVU1272 0.14 +1.5 1,362,599 - gspE DVU1272 0.15 +1.3 1,362,613 + gspE DVU1272 0.15 -0.3 1,362,807 + gspE DVU1272 0.27 +0.1 1,362,861 + gspE DVU1272 0.30 +0.1 1,362,896 - gspE DVU1272 0.32 +0.5 1,362,940 + gspE DVU1272 0.34 +1.9 1,362,948 - gspE DVU1272 0.35 +0.1 1,363,005 + gspE DVU1272 0.38 -0.5 1,363,045 + gspE DVU1272 0.40 -0.8 1,363,089 + gspE DVU1272 0.43 +0.5 1,363,186 - gspE DVU1272 0.49 +0.7 1,363,186 - gspE DVU1272 0.49 -0.6 1,363,215 - gspE DVU1272 0.50 +0.2 1,363,383 + gspE DVU1272 0.60 -0.8 1,363,428 + gspE DVU1272 0.63 -0.4 1,363,443 - gspE DVU1272 0.64 -0.7 1,363,450 + gspE DVU1272 0.64 +0.8 1,363,458 - gspE DVU1272 0.64 -0.1 1,363,499 - gspE DVU1272 0.67 -1.3 1,363,504 - gspE DVU1272 0.67 -0.2 1,363,527 - gspE DVU1272 0.68 +0.3 1,363,655 + gspE DVU1272 0.76 +0.7 1,363,693 - gspE DVU1272 0.78 -1.1 1,363,768 - gspE DVU1272 0.82 +0.1 1,363,805 + gspE DVU1272 0.85 +0.3 1,363,813 + gspE DVU1272 0.85 +0.4 1,363,821 - gspE DVU1272 0.85 +0.6 1,363,897 - gspE DVU1272 0.90 +0.8 1,363,959 + +2.2 1,363,965 + -0.1 1,363,995 + +0.5 1,363,995 + +0.1 1,364,008 - +0.6 1,364,008 - +0.2 1,364,078 - -1.3 1,364,108 + -0.4 1,364,147 - -0.0 1,364,158 + -0.4 1,364,230 + -0.1 1,364,297 + -0.7 1,364,394 - -1.2 1,364,421 + +0.5 1,364,455 - -0.1 1,364,507 - +0.9 1,364,638 - DVU1273 0.18 +0.7 1,364,647 - DVU1273 0.18 -0.0 1,364,682 - DVU1273 0.21 -0.2 1,364,858 + DVU1273 0.32 +1.2 1,364,881 - DVU1273 0.33 +1.0 1,365,000 - DVU1273 0.41 +0.9 1,365,014 + DVU1273 0.42 -0.2 1,365,028 + DVU1273 0.42 -0.4
Or see this region's nucleotide sequence