Experiment: MoLS4 with L-Serine (N), without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rluD/coaE and upp are separated by 109 nucleotides upp and uraA are separated by 179 nucleotides uraA and DVU1027 are separated by 233 nucleotides
DVU1024: rluD/coaE - ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR), at 1,127,477 to 1,129,102
rluD/coaE
DVU1025: upp - uracil phosphoribosyltransferase (TIGR), at 1,129,212 to 1,129,838
upp
DVU1026: uraA - uracil permease (TIGR), at 1,130,018 to 1,131,277
uraA
DVU1027: DVU1027 - hypothetical protein (TIGR), at 1,131,511 to 1,132,482
DVU1027
Position (kb)
1130
1131
1132 Strain fitness (log2 ratio)
-2
-1
0
1 at 1129.079 kb on - strand at 1129.102 kb on - strand at 1129.203 kb on - strand at 1129.205 kb on - strand at 1129.882 kb on + strand at 1129.951 kb on + strand at 1129.954 kb on - strand at 1130.010 kb on + strand at 1130.158 kb on + strand, within uraA at 1130.254 kb on + strand, within uraA at 1130.269 kb on + strand, within uraA at 1130.269 kb on + strand, within uraA at 1130.277 kb on - strand, within uraA at 1130.312 kb on + strand, within uraA at 1130.320 kb on - strand, within uraA at 1130.320 kb on - strand, within uraA at 1130.323 kb on - strand, within uraA at 1130.378 kb on - strand, within uraA at 1130.477 kb on + strand, within uraA at 1130.485 kb on - strand, within uraA at 1130.485 kb on - strand, within uraA at 1130.494 kb on + strand, within uraA at 1130.502 kb on - strand, within uraA at 1130.502 kb on - strand, within uraA at 1130.650 kb on + strand, within uraA at 1130.658 kb on - strand, within uraA at 1130.658 kb on - strand, within uraA at 1130.820 kb on + strand, within uraA at 1130.839 kb on + strand, within uraA at 1130.865 kb on - strand, within uraA at 1130.886 kb on - strand, within uraA at 1130.907 kb on + strand, within uraA at 1130.928 kb on - strand, within uraA at 1130.959 kb on + strand, within uraA at 1131.044 kb on - strand, within uraA at 1131.106 kb on + strand, within uraA at 1131.106 kb on - strand, within uraA at 1131.106 kb on - strand, within uraA at 1131.404 kb on + strand at 1131.412 kb on - strand at 1131.421 kb on + strand at 1131.581 kb on + strand at 1131.581 kb on + strand at 1131.583 kb on - strand at 1131.681 kb on - strand, within DVU1027 at 1131.795 kb on + strand, within DVU1027 at 1131.808 kb on + strand, within DVU1027 at 1131.810 kb on + strand, within DVU1027 at 1131.816 kb on - strand, within DVU1027 at 1131.823 kb on + strand, within DVU1027 at 1131.838 kb on - strand, within DVU1027 at 1131.853 kb on - strand, within DVU1027 at 1131.922 kb on - strand, within DVU1027 at 1131.955 kb on + strand, within DVU1027 at 1131.957 kb on + strand, within DVU1027 at 1131.965 kb on - strand, within DVU1027 at 1131.973 kb on + strand, within DVU1027 at 1131.981 kb on - strand, within DVU1027 at 1132.001 kb on + strand, within DVU1027 at 1132.009 kb on - strand, within DVU1027 at 1132.009 kb on - strand, within DVU1027 at 1132.014 kb on - strand, within DVU1027 at 1132.072 kb on - strand, within DVU1027 at 1132.100 kb on + strand, within DVU1027 at 1132.124 kb on + strand, within DVU1027 at 1132.132 kb on + strand, within DVU1027 at 1132.271 kb on + strand, within DVU1027
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without Molybdate/Tungstate remove 1,129,079 - -1.3 1,129,102 - -0.7 1,129,203 - -0.3 1,129,205 - -0.1 1,129,882 + +0.8 1,129,951 + -0.6 1,129,954 - -0.2 1,130,010 + -0.4 1,130,158 + uraA DVU1026 0.11 -0.6 1,130,254 + uraA DVU1026 0.19 -0.3 1,130,269 + uraA DVU1026 0.20 +0.5 1,130,269 + uraA DVU1026 0.20 +0.1 1,130,277 - uraA DVU1026 0.21 -0.8 1,130,312 + uraA DVU1026 0.23 -1.4 1,130,320 - uraA DVU1026 0.24 -0.5 1,130,320 - uraA DVU1026 0.24 -0.7 1,130,323 - uraA DVU1026 0.24 +0.8 1,130,378 - uraA DVU1026 0.29 -0.3 1,130,477 + uraA DVU1026 0.36 -1.1 1,130,485 - uraA DVU1026 0.37 +0.1 1,130,485 - uraA DVU1026 0.37 -0.4 1,130,494 + uraA DVU1026 0.38 +0.4 1,130,502 - uraA DVU1026 0.38 -2.3 1,130,502 - uraA DVU1026 0.38 -1.6 1,130,650 + uraA DVU1026 0.50 -1.4 1,130,658 - uraA DVU1026 0.51 +0.8 1,130,658 - uraA DVU1026 0.51 +0.7 1,130,820 + uraA DVU1026 0.64 -0.8 1,130,839 + uraA DVU1026 0.65 -0.6 1,130,865 - uraA DVU1026 0.67 -0.3 1,130,886 - uraA DVU1026 0.69 -0.1 1,130,907 + uraA DVU1026 0.71 -0.3 1,130,928 - uraA DVU1026 0.72 -0.5 1,130,959 + uraA DVU1026 0.75 +0.4 1,131,044 - uraA DVU1026 0.81 +1.5 1,131,106 + uraA DVU1026 0.86 -0.4 1,131,106 - uraA DVU1026 0.86 -1.6 1,131,106 - uraA DVU1026 0.86 -0.5 1,131,404 + -0.1 1,131,412 - +0.6 1,131,421 + +0.2 1,131,581 + +0.0 1,131,581 + +0.3 1,131,583 - +0.1 1,131,681 - DVU1027 0.17 -2.3 1,131,795 + DVU1027 0.29 -0.7 1,131,808 + DVU1027 0.31 -0.4 1,131,810 + DVU1027 0.31 +0.1 1,131,816 - DVU1027 0.31 +0.2 1,131,823 + DVU1027 0.32 -1.7 1,131,838 - DVU1027 0.34 +0.2 1,131,853 - DVU1027 0.35 +0.2 1,131,922 - DVU1027 0.42 +0.9 1,131,955 + DVU1027 0.46 -0.8 1,131,957 + DVU1027 0.46 +0.9 1,131,965 - DVU1027 0.47 +0.5 1,131,973 + DVU1027 0.48 +0.1 1,131,981 - DVU1027 0.48 -0.1 1,132,001 + DVU1027 0.50 -0.5 1,132,009 - DVU1027 0.51 -0.1 1,132,009 - DVU1027 0.51 +0.3 1,132,014 - DVU1027 0.52 +0.5 1,132,072 - DVU1027 0.58 -0.0 1,132,100 + DVU1027 0.61 -0.7 1,132,124 + DVU1027 0.63 -0.3 1,132,132 + DVU1027 0.64 +0.0 1,132,271 + DVU1027 0.78 +0.4
Or see this region's nucleotide sequence