Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF19331

Experiment: MoLS4 with L-Serine (N), without Molybdate/Tungstate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2631 and DORF19328 are separated by 65 nucleotidesDORF19328 and DORF19331 overlap by 13 nucleotidesDORF19331 and DVU2633 are separated by 241 nucleotides DVU2631: DVU2631 - hypothetical protein (TIGR), at 2,747,566 to 2,747,937 DVU2631 DORF19328: DORF19328 - no description, at 2,748,003 to 2,748,440 DORF19328 DORF19331: DORF19331 - no description, at 2,748,428 to 2,748,589 DORF19331 DVU2633: DVU2633 - transcriptional regulator, putative (TIGR), at 2,748,831 to 2,749,565 DVU2633 Position (kb) 2748 2749Strain fitness (log2 ratio) -1 0 1 2at 2747.554 kb on - strandat 2747.561 kb on - strandat 2747.561 kb on - strandat 2747.563 kb on + strandat 2747.563 kb on + strandat 2747.566 kb on + strandat 2747.571 kb on - strandat 2747.571 kb on - strandat 2747.576 kb on - strandat 2747.711 kb on + strand, within DVU2631at 2747.746 kb on - strand, within DVU2631at 2747.783 kb on - strand, within DVU2631at 2747.922 kb on + strandat 2747.940 kb on - strandat 2748.085 kb on + strand, within DORF19328at 2748.090 kb on + strand, within DORF19328at 2748.158 kb on + strand, within DORF19328at 2748.183 kb on + strand, within DORF19328at 2748.191 kb on + strand, within DORF19328at 2748.199 kb on - strand, within DORF19328at 2748.199 kb on - strand, within DORF19328at 2748.279 kb on + strand, within DORF19328at 2748.281 kb on - strand, within DORF19328at 2748.323 kb on + strand, within DORF19328at 2748.329 kb on - strand, within DORF19328at 2748.329 kb on - strand, within DORF19328at 2748.345 kb on + strand, within DORF19328at 2748.451 kb on + strand, within DORF19331at 2748.480 kb on - strand, within DORF19331at 2748.606 kb on - strandat 2748.608 kb on + strandat 2748.616 kb on - strandat 2748.626 kb on + strandat 2748.626 kb on + strandat 2748.632 kb on - strandat 2748.707 kb on - strandat 2748.717 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N), without Molybdate/Tungstate
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2,747,554 - -0.1
2,747,561 - +0.8
2,747,561 - +0.0
2,747,563 + -0.9
2,747,563 + +0.4
2,747,566 + +0.0
2,747,571 - -1.0
2,747,571 - -0.4
2,747,576 - +0.1
2,747,711 + DVU2631 0.39 +0.2
2,747,746 - DVU2631 0.48 +0.7
2,747,783 - DVU2631 0.58 +0.6
2,747,922 + -0.3
2,747,940 - +0.1
2,748,085 + DORF19328 0.19 -1.3
2,748,090 + DORF19328 0.20 -0.5
2,748,158 + DORF19328 0.35 -0.3
2,748,183 + DORF19328 0.41 -0.6
2,748,191 + DORF19328 0.43 -0.8
2,748,199 - DORF19328 0.45 -1.4
2,748,199 - DORF19328 0.45 -0.1
2,748,279 + DORF19328 0.63 +0.1
2,748,281 - DORF19328 0.63 -0.2
2,748,323 + DORF19328 0.73 +0.0
2,748,329 - DORF19328 0.74 -1.6
2,748,329 - DORF19328 0.74 +2.0
2,748,345 + DORF19328 0.78 -0.2
2,748,451 + DORF19331 0.14 -0.3
2,748,480 - DORF19331 0.32 -1.3
2,748,606 - -0.9
2,748,608 + +0.7
2,748,616 - +1.2
2,748,626 + -0.1
2,748,626 + -1.3
2,748,632 - +0.1
2,748,707 - -0.0
2,748,717 - +0.0

Or see this region's nucleotide sequence