Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4474

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
5,333,035	+		Psyr_4472	0.77	+0.8
5,333,153	-				+0.1
5,333,153	-				-0.3
5,333,222	+				+0.8
5,333,222	+				-1.1
5,333,222	+				-1.1
5,333,223	-				+0.0
5,333,231	-				+1.1
5,333,474	+		Psyr_4473	0.31	-2.2
5,333,475	-		Psyr_4473	0.32	+0.1
5,333,475	-		Psyr_4473	0.32	+1.3
5,333,475	-		Psyr_4473	0.32	+1.3
5,333,475	-		Psyr_4473	0.32	-1.5
5,333,530	+		Psyr_4473	0.40	-0.2
5,333,530	+		Psyr_4473	0.40	-2.2
5,333,616	-		Psyr_4473	0.52	+1.5
5,333,652	-		Psyr_4473	0.57	+0.8
5,333,672	+		Psyr_4473	0.60	+0.3
5,333,672	+		Psyr_4473	0.60	+0.3
5,333,672	+		Psyr_4473	0.60	-1.1
5,333,673	-		Psyr_4473	0.60	+1.8
5,333,673	-		Psyr_4473	0.60	+0.9
5,333,673	-		Psyr_4473	0.60	+1.0
5,333,780	+		Psyr_4473	0.76	+0.0
5,333,780	+		Psyr_4473	0.76	+0.5
5,333,780	+		Psyr_4473	0.76	+1.0
5,333,780	+		Psyr_4473	0.76	+0.3
5,333,780	+		Psyr_4473	0.76	-0.2
5,333,780	+		Psyr_4473	0.76	+0.8
5,333,780	+		Psyr_4473	0.76	-1.1
5,333,781	-		Psyr_4473	0.76	-0.5
5,333,781	-		Psyr_4473	0.76	+1.8
5,333,781	-		Psyr_4473	0.76	+0.0
5,333,781	-		Psyr_4473	0.76	-0.6
5,333,781	-		Psyr_4473	0.76	-0.9
5,333,800	-		Psyr_4473	0.79	-1.2
5,333,800	-		Psyr_4473	0.79	-0.2
5,333,800	-		Psyr_4473	0.79	-0.7
5,333,823	-		Psyr_4473	0.82	-1.7
5,333,823	-		Psyr_4473	0.82	+1.2
5,333,823	-		Psyr_4473	0.82	+0.2
5,333,915	+				+1.1
5,333,915	+				-0.2
5,333,915	+				+0.6
5,333,915	+				+1.8
5,333,915	+				+0.3
5,333,915	+				+1.2
5,333,915	+				-0.2
5,333,915	+				+0.9
5,333,915	+				+0.3
5,333,915	+				+0.7
5,333,915	+				-0.1
5,333,916	-				+1.0
5,333,916	-				+2.2
5,333,916	-				-0.8
5,333,916	-				+2.0
5,333,916	-				-1.5
5,333,916	-				+1.0
5,333,916	-				-1.1
5,333,916	-				+0.6
5,333,916	-				-1.5
5,333,916	-				+0.8
5,333,934	-				+0.2
5,334,041	+				-0.3
5,334,041	+				-0.2
5,334,042	-				-0.1
5,334,042	-				+0.9
5,334,085	-				+1.3
5,334,297	-		Psyr_4474	0.21	+0.8
5,335,499	+				+0.2
5,335,499	+				+1.0
5,335,499	+				+0.8