Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3244

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
3,884,066	-		Psyr_3243	0.84	-1.0
3,884,103	+		Psyr_3243	0.86	-0.4
3,884,103	+		Psyr_3243	0.86	+1.6
3,884,103	+		Psyr_3243	0.86	+0.6
3,884,104	-		Psyr_3243	0.86	-0.9
3,884,104	-		Psyr_3243	0.86	+1.0
3,884,104	-		Psyr_3243	0.86	-0.1
3,884,152	+		Psyr_3243	0.88	+0.8
3,884,152	+		Psyr_3243	0.88	+0.1
3,884,153	-		Psyr_3243	0.88	-0.9
3,884,153	-		Psyr_3243	0.88	+1.1
3,884,415	+				+1.5
3,884,415	+				+0.8
3,884,415	+				+0.1
3,884,416	-				+0.2
3,884,416	-				-1.0
3,884,416	-				-0.1
3,884,667	-				-0.7
3,884,703	+				-0.6
3,884,703	+				+2.4
3,884,704	-				+0.4
3,884,845	+		Psyr_3244	0.10	+0.6
3,884,845	+		Psyr_3244	0.10	-0.5
3,884,845	+		Psyr_3244	0.10	-0.7
3,884,845	+		Psyr_3244	0.10	+0.6
3,884,845	+		Psyr_3244	0.10	-0.9
3,884,845	+		Psyr_3244	0.10	+1.0
3,884,845	+		Psyr_3244	0.10	+0.2
3,884,845	+		Psyr_3244	0.10	+0.4
3,884,845	+		Psyr_3244	0.10	+3.5
3,884,846	-		Psyr_3244	0.11	+0.4
3,884,846	-		Psyr_3244	0.11	-1.2
3,884,861	-		Psyr_3244	0.12	-0.3
3,884,861	-		Psyr_3244	0.12	+0.4
3,884,861	-		Psyr_3244	0.12	-0.3
3,884,905	+		Psyr_3244	0.15	+1.2
3,884,906	-		Psyr_3244	0.15	-0.2
3,885,037	+		Psyr_3244	0.25	-0.4
3,885,038	-		Psyr_3244	0.25	+1.2
3,885,059	-		Psyr_3244	0.26	+0.8
3,885,136	+		Psyr_3244	0.32	+2.4
3,885,136	+		Psyr_3244	0.32	+0.4
3,885,136	+		Psyr_3244	0.32	-0.3
3,885,136	+		Psyr_3244	0.32	+0.2
3,885,137	-		Psyr_3244	0.32	+0.9
3,885,137	-		Psyr_3244	0.32	+0.2
3,885,137	-		Psyr_3244	0.32	+0.6
3,885,137	-		Psyr_3244	0.32	+0.1
3,885,137	-		Psyr_3244	0.32	+0.2
3,885,164	-		Psyr_3244	0.34	+0.6
3,885,180	+		Psyr_3244	0.35	-0.8
3,885,184	+		Psyr_3244	0.36	+0.9
3,885,260	+		Psyr_3244	0.41	+0.5
3,885,260	+		Psyr_3244	0.41	-0.8
3,885,261	-		Psyr_3244	0.41	+1.4
3,885,261	-		Psyr_3244	0.41	-0.1
3,885,508	+		Psyr_3244	0.60	+1.8
3,885,509	-		Psyr_3244	0.60	+0.9
3,885,509	-		Psyr_3244	0.60	+0.2
3,885,509	-		Psyr_3244	0.60	+1.1
3,885,655	+		Psyr_3244	0.71	-1.0
3,885,656	-		Psyr_3244	0.71	-0.5
3,885,661	+		Psyr_3244	0.71	-1.0
3,885,661	+		Psyr_3244	0.71	+0.3
3,885,790	+		Psyr_3244	0.81	+0.0
3,885,790	+		Psyr_3244	0.81	+0.0
3,885,943	+				-0.3
3,885,944	-				+0.2
3,885,944	-				-0.4
3,885,944	-				+0.0
3,885,971	-				-0.2
3,886,076	+				-0.4
3,886,076	+				+0.2
3,886,077	-				+0.4
3,886,100	+				-0.9
3,886,100	+				+1.2
3,886,101	-				-0.3
3,886,101	-				+0.4
3,886,101	-				-1.1
3,886,703	+		Psyr_3245	0.22	-0.1
3,886,704	-		Psyr_3245	0.22	-0.1
3,886,704	-		Psyr_3245	0.22	-1.7
3,886,704	-		Psyr_3245	0.22	+0.5
3,886,939	+		Psyr_3245	0.31	+0.6
3,887,020	-		Psyr_3245	0.34	-0.6
3,887,020	-		Psyr_3245	0.34	+0.2