Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3199

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
3,828,045	+		Psyr_3197	0.82	-1.2
3,828,045	+		Psyr_3197	0.82	-0.6
3,828,136	+				-1.2
3,828,137	-				+1.4
3,828,241	+		Psyr_3198	0.16	+0.4
3,828,241	+		Psyr_3198	0.16	+2.7
3,828,241	+		Psyr_3198	0.16	-1.6
3,828,242	-		Psyr_3198	0.17	-0.0
3,828,334	+		Psyr_3198	0.30	+0.1
3,828,334	+		Psyr_3198	0.30	-1.6
3,828,482	-		Psyr_3198	0.52	+1.4
3,828,602	-		Psyr_3198	0.70	+0.6
3,828,766	-				-0.2
3,828,823	+				+1.4
3,828,878	+				-0.6
3,828,900	+				+1.8
3,828,900	+				-1.8
3,828,912	+				+0.4
3,828,912	+				-2.8
3,828,913	-				-0.8
3,829,158	+		Psyr_3199	0.16	-2.2
3,829,158	+		Psyr_3199	0.16	-0.9
3,829,231	+		Psyr_3199	0.20	+0.2
3,829,503	+		Psyr_3199	0.35	+1.0
3,829,504	-		Psyr_3199	0.35	+0.4
3,829,504	-		Psyr_3199	0.35	+0.4
3,829,720	-		Psyr_3199	0.47	-1.6
3,829,836	+		Psyr_3199	0.54	+0.4
3,829,837	-		Psyr_3199	0.54	+1.4
3,829,899	+		Psyr_3199	0.57	+0.6
3,830,041	-		Psyr_3199	0.65	-2.2
3,830,041	-		Psyr_3199	0.65	-3.2
3,830,496	+				+1.0
3,830,885	+		Psyr_3200	0.45	-2.2
3,831,157	-				+2.4
3,831,157	-				-0.6
3,831,568	-		Psyr_3201	0.30	-0.9
3,831,568	-		Psyr_3201	0.30	+1.0