Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3134

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
3,758,376	+				+0.8
3,758,405	+				-0.4
3,758,405	+				+1.8
3,758,405	+				+2.0
3,758,405	+				-0.2
3,758,405	+				+0.2
3,758,405	+				+0.5
3,758,405	+				+1.0
3,758,405	+				+3.0
3,758,405	+				-0.5
3,758,405	+				+0.4
3,758,405	+				-0.3
3,758,406	-				-0.2
3,758,406	-				+0.7
3,758,406	-				+0.7
3,758,406	-				+0.5
3,758,406	-				-0.6
3,758,406	-				+0.8
3,758,406	-				-1.4
3,758,406	-				+1.3
3,758,406	-				+1.2
3,758,406	-				-0.6
3,758,406	-				+2.4
3,758,406	-				-1.4
3,758,406	-				+0.0
3,758,406	-				+0.9
3,758,406	-				+2.7
3,758,406	-				-0.9
3,758,406	-				-0.6
3,758,406	-				-0.2
3,758,406	-				-0.4
3,758,406	-				-1.2
3,758,406	-				+1.4
3,758,406	-				-0.4
3,758,406	-				+0.4
3,758,407	+				-0.4
3,758,407	+				+1.0
3,758,407	+				-0.2
3,758,407	+				-0.0
3,758,408	-				-0.6
3,758,408	-				+0.8
3,758,501	+				+0.4
3,758,501	+				+2.0
3,758,501	+				+0.1
3,758,501	+				+0.7
3,758,502	-				+1.6
3,758,502	-				-0.6
3,758,502	-				-0.0
3,758,698	+		Psyr_3133	0.30	-0.8
3,758,699	-		Psyr_3133	0.30	+1.1
3,758,699	-		Psyr_3133	0.30	-2.2
3,759,203	-		Psyr_3133	0.89	+0.1
3,759,278	+				-0.6
3,759,303	+				-0.5
3,759,304	-				+1.9
3,759,304	-				-0.4
3,759,461	+				-2.4
3,759,516	+		Psyr_3134	0.13	+1.4
3,759,516	+		Psyr_3134	0.13	-0.3
3,759,516	+		Psyr_3134	0.13	-1.9
3,759,516	+		Psyr_3134	0.13	-1.3
3,759,516	+		Psyr_3134	0.13	-0.7
3,759,517	-		Psyr_3134	0.13	-0.6
3,759,517	-		Psyr_3134	0.13	-1.2
3,759,566	+		Psyr_3134	0.17	+1.2
3,759,566	+		Psyr_3134	0.17	-0.3
3,759,567	-		Psyr_3134	0.17	+1.2
3,759,713	+		Psyr_3134	0.28	-0.3
3,759,713	+		Psyr_3134	0.28	-0.1
3,759,714	-		Psyr_3134	0.28	+0.1
3,759,957	+		Psyr_3134	0.47	+0.2
3,760,152	-		Psyr_3134	0.62	+1.4
3,760,152	-		Psyr_3134	0.62	+0.5
3,760,359	+		Psyr_3134	0.78	+0.6
3,760,360	-		Psyr_3134	0.79	-1.1
3,760,642	+				-0.9
3,760,704	+				-0.4
3,760,761	+		Psyr_3135	0.10	-1.6
3,760,762	-		Psyr_3135	0.10	-2.6
3,760,828	-		Psyr_3135	0.19	-2.1
3,760,900	-		Psyr_3135	0.29	-0.0
3,761,380	-				-0.3
3,761,438	+				-0.4
3,761,517	+				-0.6
3,761,517	+				+0.1
3,761,518	-				+0.9
3,761,568	+				+1.7
3,761,568	+				-1.2