Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3074

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
3,673,062	+		Psyr_3073	0.32	+0.0
3,673,069	+		Psyr_3073	0.32	+0.4
3,673,070	-		Psyr_3073	0.33	-0.9
3,673,077	+		Psyr_3073	0.33	-0.1
3,673,105	-		Psyr_3073	0.36	-0.5
3,673,119	+		Psyr_3073	0.38	-0.0
3,673,120	-		Psyr_3073	0.38	-1.7
3,673,188	-		Psyr_3073	0.46	-1.0
3,673,190	-		Psyr_3073	0.46	+0.6
3,673,190	-		Psyr_3073	0.46	+0.7
3,673,449	+		Psyr_3073	0.74	+0.1
3,673,478	+		Psyr_3073	0.77	-0.6
3,673,478	+		Psyr_3073	0.77	-0.8
3,673,478	+		Psyr_3073	0.77	-1.4
3,673,478	+		Psyr_3073	0.77	-0.9
3,673,479	-		Psyr_3073	0.77	+0.6
3,673,591	-		Psyr_3073	0.90	-0.3
3,673,693	+				+0.8
3,673,717	-				+0.2
3,673,720	+				-0.4
3,673,720	+				+0.7
3,673,773	+				+0.8
3,673,827	+				+0.4
3,673,827	+				+0.6
3,673,828	-				-0.3
3,673,828	-				+0.2
3,673,828	-				+0.1
3,673,901	+				+0.3
3,673,906	+				+3.1
3,673,906	+				+1.4
3,673,907	-				-1.0
3,673,908	+				-0.8
3,673,908	+				+1.0
3,673,908	+				+0.1
3,673,908	+				+0.4
3,673,909	-				-0.6
3,673,909	-				+0.4
3,673,909	-				-1.1
3,673,909	-				-0.6
3,673,909	-				-1.4
3,673,912	+				+1.3
3,673,912	+				-1.4
3,673,912	+				+0.4
3,673,913	-				-1.9
3,673,913	-				-0.3
3,673,918	+				-0.7
3,673,918	+				+0.2
3,673,919	-				+3.4
3,673,919	-				+0.2
3,673,928	+				+0.5
3,673,929	-				-3.7
3,673,929	-				-1.1
3,673,946	+				+0.7
3,673,946	+				-0.2
3,673,946	+				+1.1
3,673,946	+				+0.7
3,673,946	+				-0.5
3,673,946	+				+1.2
3,673,946	+				+1.2
3,673,947	-				+0.0
3,673,947	-				-0.9
3,673,947	-				-1.7
3,673,947	-				+0.6
3,673,947	-				+0.1
3,673,947	-				+0.4
3,673,947	-				-0.4
3,673,948	-				-1.5
3,673,950	-				-2.6
3,673,956	-				-0.7
3,674,002	+				+2.4
3,674,003	-				-0.5
3,674,051	-				+0.8
3,674,066	+				-0.4
3,674,066	+				-0.0
3,674,066	+				+1.4
3,674,066	+				+1.1
3,674,066	+				-0.2
3,674,067	-				-0.6
3,674,067	-				-0.6
3,674,067	-				+0.1
3,674,067	-				-1.2
3,674,067	-				+0.4
3,674,067	-				-0.6
3,674,067	-				+1.7
3,674,067	-				+0.9
3,674,231	+				-0.6
3,674,358	+		Psyr_3074	0.14	-0.6
3,674,358	+		Psyr_3074	0.14	-0.6
3,674,358	+		Psyr_3074	0.14	-0.1
3,674,358	+		Psyr_3074	0.14	-0.4
3,674,358	+		Psyr_3074	0.14	-0.0
3,674,359	-		Psyr_3074	0.14	+0.2
3,674,359	-		Psyr_3074	0.14	-0.3
3,674,359	-		Psyr_3074	0.14	+0.3
3,674,359	-		Psyr_3074	0.14	+0.4
3,674,359	-		Psyr_3074	0.14	+0.3
3,674,467	+		Psyr_3074	0.18	-0.0
3,674,578	+		Psyr_3074	0.22	+0.4
3,674,687	+		Psyr_3074	0.26	-1.8
3,674,688	-		Psyr_3074	0.27	+0.4
3,674,688	-		Psyr_3074	0.27	-2.0
3,674,712	-		Psyr_3074	0.27	-0.1
3,674,712	-		Psyr_3074	0.27	-0.1
3,674,739	+		Psyr_3074	0.29	-0.5
3,674,739	+		Psyr_3074	0.29	-0.9
3,674,739	+		Psyr_3074	0.29	+0.2
3,674,740	-		Psyr_3074	0.29	-0.4
3,674,740	-		Psyr_3074	0.29	-0.2
3,674,740	-				-1.1
3,674,740	-		Psyr_3074	0.29	+0.2
3,674,740	-		Psyr_3074	0.29	-2.0
3,674,743	+		Psyr_3074	0.29	-0.9
3,674,743	+		Psyr_3074	0.29	-0.2
3,674,743	+		Psyr_3074	0.29	-0.9
3,674,743	+		Psyr_3074	0.29	-0.1
3,674,743	+		Psyr_3074	0.29	+0.2
3,674,743	+		Psyr_3074	0.29	-1.7
3,674,743	+		Psyr_3074	0.29	+0.3
3,674,744	-		Psyr_3074	0.29	+0.1
3,674,744	-		Psyr_3074	0.29	+0.2
3,674,744	-		Psyr_3074	0.29	-0.4
3,674,744	-		Psyr_3074	0.29	-2.7
3,674,744	-		Psyr_3074	0.29	-1.0
3,674,744	-		Psyr_3074	0.29	+0.4
3,674,836	+		Psyr_3074	0.32	-1.1
3,674,836	+		Psyr_3074	0.32	+1.2
3,674,870	-		Psyr_3074	0.34	-0.1
3,674,878	+		Psyr_3074	0.34	-0.1
3,674,878	+		Psyr_3074	0.34	-0.6
3,674,879	-		Psyr_3074	0.34	+0.2
3,674,879	-		Psyr_3074	0.34	-0.6
3,674,879	-		Psyr_3074	0.34	+1.9
3,674,879	-		Psyr_3074	0.34	-0.4
3,674,879	-		Psyr_3074	0.34	-0.9
3,674,902	+		Psyr_3074	0.35	+0.1
3,674,956	+		Psyr_3074	0.37	+0.9
3,674,957	-				-1.4
3,674,957	-		Psyr_3074	0.37	-1.4
3,674,957	-		Psyr_3074	0.37	+0.2
3,675,064	+		Psyr_3074	0.41	-0.3
3,675,071	+		Psyr_3074	0.41	-0.0
3,675,236	-		Psyr_3074	0.48	-1.7
3,675,269	+		Psyr_3074	0.49	-0.8
3,675,332	+		Psyr_3074	0.52	-0.8
3,675,333	-		Psyr_3074	0.52	-0.4
3,675,333	-		Psyr_3074	0.52	-1.4
3,675,421	+		Psyr_3074	0.55	-1.9
3,675,421	+		Psyr_3074	0.55	-1.1
3,675,422	-		Psyr_3074	0.55	-0.1
3,675,422	-		Psyr_3074	0.55	+1.3
3,675,422	-		Psyr_3074	0.55	-0.6
3,675,422	-		Psyr_3074	0.55	-1.1
3,675,458	+		Psyr_3074	0.57	+0.2
3,675,479	+		Psyr_3074	0.57	-1.7
3,675,479	+		Psyr_3074	0.57	-2.9
3,675,480	-		Psyr_3074	0.57	+0.5
3,675,480	-		Psyr_3074	0.57	+1.0
3,675,480	-		Psyr_3074	0.57	+0.3
3,675,480	-		Psyr_3074	0.57	-1.8
3,675,480	-		Psyr_3074	0.57	-0.1
3,675,553	+		Psyr_3074	0.60	+0.1
3,675,553	+		Psyr_3074	0.60	-2.4
3,675,554	-		Psyr_3074	0.60	-0.6
3,675,554	-		Psyr_3074	0.60	+0.6
3,675,554	-		Psyr_3074	0.60	+0.1
3,675,554	-		Psyr_3074	0.60	+1.7
3,675,607	+		Psyr_3074	0.62	+0.1
3,675,607	+		Psyr_3074	0.62	-0.2
3,675,607	+		Psyr_3074	0.62	+1.4
3,675,608	-		Psyr_3074	0.62	+1.2
3,675,608	-		Psyr_3074	0.62	+0.1
3,675,608	-		Psyr_3074	0.62	+0.5
3,675,608	-		Psyr_3074	0.62	-0.5
3,675,608	-		Psyr_3074	0.62	+2.7
3,675,724	+		Psyr_3074	0.67	-0.6
3,675,725	-		Psyr_3074	0.67	-1.7
3,675,730	+		Psyr_3074	0.67	+0.4
3,675,730	+		Psyr_3074	0.67	+0.1
3,675,730	+		Psyr_3074	0.67	-1.2
3,675,730	+		Psyr_3074	0.67	-2.1
3,675,730	+				-2.6
3,675,731	-		Psyr_3074	0.67	+0.2
3,675,731	-		Psyr_3074	0.67	+0.5
3,675,731	-		Psyr_3074	0.67	+2.4
3,675,731	-		Psyr_3074	0.67	-0.0
3,675,731	-		Psyr_3074	0.67	-1.4
3,675,731	-		Psyr_3074	0.67	-0.4
3,675,769	+		Psyr_3074	0.69	-0.7
3,675,770	-		Psyr_3074	0.69	+0.1
3,675,813	-		Psyr_3074	0.70	+0.8
3,675,836	+		Psyr_3074	0.71	+2.3
3,675,837	-		Psyr_3074	0.71	+1.4
3,675,845	+		Psyr_3074	0.72	-0.1
3,675,896	-		Psyr_3074	0.74	+1.2
3,675,896	-		Psyr_3074	0.74	-0.1
3,675,896	-		Psyr_3074	0.74	+0.8
3,675,896	-		Psyr_3074	0.74	+2.0
3,675,904	+		Psyr_3074	0.74	+0.9
3,675,904	+		Psyr_3074	0.74	+1.1
3,675,904	+		Psyr_3074	0.74	-0.4
3,675,904	+		Psyr_3074	0.74	-0.7
3,675,904	+				-0.6
3,675,904	+		Psyr_3074	0.74	-0.9
3,675,904	+		Psyr_3074	0.74	+0.0
3,675,904	+		Psyr_3074	0.74	-2.7
3,675,904	+		Psyr_3074	0.74	+0.4
3,675,904	+		Psyr_3074	0.74	-1.9
3,675,905	-		Psyr_3074	0.74	+1.7
3,675,905	-		Psyr_3074	0.74	+0.4
3,675,905	-		Psyr_3074	0.74	+1.0
3,675,905	-		Psyr_3074	0.74	+0.8
3,675,905	-		Psyr_3074	0.74	-0.8
3,675,905	-		Psyr_3074	0.74	-0.9
3,675,905	-		Psyr_3074	0.74	-0.2
3,675,905	-		Psyr_3074	0.74	+0.3
3,675,905	-		Psyr_3074	0.74	-0.1
3,675,934	+		Psyr_3074	0.75	+1.4
3,675,934	+		Psyr_3074	0.75	+0.4
3,675,934	+		Psyr_3074	0.75	-1.0
3,675,934	+		Psyr_3074	0.75	-2.2
3,675,934	+		Psyr_3074	0.75	-0.3
3,675,934	+		Psyr_3074	0.75	-0.9
3,675,935	-		Psyr_3074	0.75	+0.3
3,675,935	-		Psyr_3074	0.75	+1.2
3,675,935	-		Psyr_3074	0.75	+1.1
3,675,935	-		Psyr_3074	0.75	-0.1
3,675,935	-		Psyr_3074	0.75	-0.5
3,675,935	-		Psyr_3074	0.75	+1.7
3,676,090	+		Psyr_3074	0.81	-1.3
3,676,090	+		Psyr_3074	0.81	+0.4
3,676,090	+		Psyr_3074	0.81	+0.6
3,676,091	-		Psyr_3074	0.81	-1.1
3,676,091	-		Psyr_3074	0.81	+0.6
3,676,151	+		Psyr_3074	0.83	-0.6
3,676,152	-		Psyr_3074	0.84	-0.2
3,676,247	-		Psyr_3074	0.87	-0.8
3,676,247	-		Psyr_3074	0.87	-0.6
3,676,306	+		Psyr_3074	0.90	-1.0
3,676,306	+		Psyr_3074	0.90	+0.1
3,676,306	+		Psyr_3074	0.90	+0.7
3,676,312	+		Psyr_3074	0.90	+2.8
3,676,312	+		Psyr_3074	0.90	-0.6
3,676,313	-		Psyr_3074	0.90	-0.5
3,676,313	-		Psyr_3074	0.90	+0.3
3,676,313	-		Psyr_3074	0.90	+0.1
3,676,316	+		Psyr_3074	0.90	+0.7
3,676,317	-		Psyr_3074	0.90	-0.7
3,676,442	-				+0.2
3,676,497	+				+0.5
3,676,498	-				-0.7
3,676,519	+				+0.4
3,676,550	+				+1.4
3,676,553	+				-1.3
3,676,553	+				-0.6
3,676,553	+				-1.1
3,676,553	+				-1.0
3,676,553	+				-1.9
3,676,554	-				+2.4
3,676,554	-				+0.6
3,676,565	+				-1.9
3,676,566	-				-1.3
3,676,594	+				+0.0
3,676,594	+				-0.1
3,676,594	+				+0.8
3,676,595	-				-0.0
3,676,600	+				-2.3
3,676,604	-				+0.6
3,676,620	+				-0.1
3,676,621	-				-0.6
3,676,621	-				-1.4
3,676,775	-		Psyr_3075	0.11	-0.9
3,676,794	+		Psyr_3075	0.12	-0.3
3,676,794	+		Psyr_3075	0.12	-0.9
3,676,794	+		Psyr_3075	0.12	+0.4
3,676,794	+		Psyr_3075	0.12	-0.3
3,676,794	+		Psyr_3075	0.12	+1.1
3,676,795	-		Psyr_3075	0.12	-0.8
3,676,856	+		Psyr_3075	0.16	-0.0
3,676,857	-		Psyr_3075	0.17	-1.5
3,676,867	-		Psyr_3075	0.17	+0.7
3,676,982	+		Psyr_3075	0.25	-0.1
3,676,985	+		Psyr_3075	0.26	+0.1
3,676,985	+		Psyr_3075	0.26	-1.4
3,676,985	+		Psyr_3075	0.26	-0.1
3,676,986	-		Psyr_3075	0.26	+0.4
3,676,986	-		Psyr_3075	0.26	-0.8
3,676,986	-		Psyr_3075	0.26	+0.7
3,676,986	-		Psyr_3075	0.26	-0.9
3,677,013	-		Psyr_3075	0.27	+0.7
3,677,299	-		Psyr_3075	0.48	+0.4
3,677,316	+		Psyr_3075	0.49	+0.4
3,677,317	-		Psyr_3075	0.49	-0.3
3,677,317	-		Psyr_3075	0.49	+1.0
3,677,317	-		Psyr_3075	0.49	+1.2
3,677,317	-		Psyr_3075	0.49	-0.3
3,677,317	-				-0.1
3,677,317	-		Psyr_3075	0.49	-0.1
3,677,445	-		Psyr_3075	0.58	+1.8
3,677,459	-		Psyr_3075	0.59	+0.4
3,677,466	+		Psyr_3075	0.59	+0.2
3,677,507	+		Psyr_3075	0.62	+0.4
3,677,507	+		Psyr_3075	0.62	-0.4
3,677,507	+		Psyr_3075	0.62	+0.4
3,677,507	+		Psyr_3075	0.62	-1.0
3,677,507	+		Psyr_3075	0.62	-0.9
3,677,507	+		Psyr_3075	0.62	-0.5
3,677,507	+		Psyr_3075	0.62	-0.0
3,677,508	-		Psyr_3075	0.62	-0.6
3,677,508	-		Psyr_3075	0.62	-0.6
3,677,508	-		Psyr_3075	0.62	+0.8
3,677,508	-		Psyr_3075	0.62	-2.7
3,677,531	+		Psyr_3075	0.64	-0.3