Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2602

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
3,054,613	-				+2.5
3,054,613	-				-1.8
3,054,613	-				-0.9
3,054,616	+				-0.5
3,054,616	+				-2.8
3,054,659	-				+3.1
3,054,659	-				-0.7
3,054,662	+				+0.4
3,054,682	-				+0.5
3,054,683	+				-1.1
3,054,709	+				+0.4
3,054,713	+				-0.5
3,054,734	+				+0.1
3,054,734	+				+0.6
3,054,742	+				-0.2
3,054,743	-				-1.2
3,054,825	+				-0.3
3,054,881	+				+1.0
3,054,924	-				-0.7
3,054,944	-				+1.2
3,055,055	+				+2.5
3,055,066	+				+0.2
3,055,066	+				-0.4
3,055,066	+				+1.4
3,055,066	+				+0.8
3,055,067	-				-2.1
3,055,068	+				-0.3
3,055,068	+				-0.0
3,055,068	+				+0.7
3,055,068	+				-0.3
3,055,068	+				+1.5
3,055,068	+				-1.3
3,055,068	+				+0.5
3,055,069	-				+1.1
3,055,069	-				+1.1
3,055,069	-				+1.5
3,055,069	-				+2.5
3,055,069	-				+1.5
3,055,089	+				-1.5
3,055,182	+				+1.1
3,055,201	+				-0.2
3,055,291	+				-3.4
3,055,292	-				-0.5
3,055,423	+				+0.0
3,055,446	+				-0.8
3,055,446	+				-0.5
3,055,446	+				+1.0
3,055,447	-				-1.1
3,055,606	+				-2.1
3,055,606	+				+0.2
3,055,607	-				-2.3
3,055,607	-				-0.3
3,055,685	+		Psyr_2602	0.11	-0.4
3,055,685	+		Psyr_2602	0.11	+0.0
3,055,685	+		Psyr_2602	0.11	+0.6
3,055,685	+		Psyr_2602	0.11	-1.4
3,055,686	-		Psyr_2602	0.11	-0.5
3,055,851	+		Psyr_2602	0.31	+0.0
3,055,955	-		Psyr_2602	0.44	+0.8
3,056,009	+		Psyr_2602	0.51	+0.5
3,056,009	+		Psyr_2602	0.51	-1.2
3,056,010	-		Psyr_2602	0.51	-3.0
3,056,010	-		Psyr_2602	0.51	-1.1
3,056,010	-		Psyr_2602	0.51	-0.8
3,056,048	+		Psyr_2602	0.56	-0.1
3,056,048	+		Psyr_2602	0.56	-1.7
3,056,048	+		Psyr_2602	0.56	-1.2
3,056,048	+		Psyr_2602	0.56	-0.2
3,056,048	+		Psyr_2602	0.56	-2.0
3,056,049	-		Psyr_2602	0.56	-2.7
3,056,049	-		Psyr_2602	0.56	-0.4
3,056,303	+		Psyr_2602	0.87	-1.7
3,056,303	+		Psyr_2602	0.87	-2.8
3,056,303	+		Psyr_2602	0.87	-0.7
3,056,303	+		Psyr_2602	0.87	-0.3
3,056,304	-		Psyr_2602	0.87	+1.4
3,056,304	-		Psyr_2602	0.87	+0.9
3,056,304	-		Psyr_2602	0.87	+0.0
3,056,304	-		Psyr_2602	0.87	-1.1
3,056,367	-				+1.7
3,056,392	+				+0.4
3,056,393	-				-0.5
3,056,407	+				-0.7
3,056,407	+				-0.5
3,056,408	-				-0.8
3,056,461	+				+0.5
3,056,477	+				+0.5
3,056,477	+				-0.4
3,056,484	+				+0.0
3,056,496	+				+0.9
3,056,524	-				-1.2
3,056,540	+				+0.2
3,056,540	+				-1.0
3,056,541	-				-0.8
3,056,546	+				-0.2
3,056,547	-				+0.2
3,056,629	+				-1.8
3,056,629	+				+1.5
3,056,630	-				+0.4
3,056,648	+				-2.5
3,056,648	+				-1.1
3,056,725	+				-0.6
3,056,726	-				-0.5
3,056,752	+				-1.5
3,056,752	+				-0.6
3,056,752	+				+3.1
3,056,752	+				+0.5
3,056,752	+				-0.4
3,056,752	+				-1.1
3,056,752	+				+0.1
3,056,752	+				-0.4
3,056,752	+				-0.3
3,056,753	-				-0.2
3,056,753	-				+0.5
3,056,753	-				+0.1
3,056,753	-				-0.6
3,056,753	-				-0.4
3,056,753	-				-0.2
3,056,753	-				-0.5
3,056,835	+				+0.7
3,056,836	-				-0.6
3,057,016	+				+2.2
3,057,016	+				-0.9
3,057,016	+				-0.3
3,057,016	+				-0.3
3,057,016	+				-0.9
3,057,016	+				+0.3
3,057,016	+				-0.7
3,057,016	+				+0.0
3,057,017	-				-1.8
3,057,017	-				+0.2
3,057,017	-				+1.9
3,057,017	-				-0.1
3,057,017	-				-0.5
3,057,057	+				-0.3
3,057,058	-				+0.4
3,057,058	-				+1.5
3,057,058	-				+1.2
3,057,058	-				-0.0
3,057,058	-				+2.5
3,057,058	-				+0.5
3,057,082	+				+1.2
3,057,082	+				+1.0
3,057,082	+				-1.2
3,057,082	+				+1.5
3,057,083	-				-3.4
3,057,083	-				+3.0
3,057,083	-				+1.3
3,057,092	-				+0.2
3,057,095	+				-0.4
3,057,096	-				+0.1
3,057,096	-				+0.1
3,057,150	-				-1.0
3,057,252	+				-0.2
3,057,252	+				+0.5
3,057,252	+				+0.1
3,057,252	+				-1.3
3,057,252	+				+2.8
3,057,252	+				+0.1
3,057,252	+				-0.3
3,057,253	-				+1.0
3,057,253	-				+1.6
3,057,253	-				+1.3
3,057,321	+		Psyr_2603	0.14	-1.3