Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2484

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,882,906	+		Psyr_2483	0.68	-1.5
2,882,907	-		Psyr_2483	0.68	-1.1
2,883,011	+		Psyr_2483	0.72	-2.7
2,883,011	+		Psyr_2483	0.72	-2.0
2,883,011	+		Psyr_2483	0.72	+0.5
2,883,011	+		Psyr_2483	0.72	-0.9
2,883,011	+		Psyr_2483	0.72	-0.9
2,883,011	+		Psyr_2483	0.72	-3.1
2,883,011	+		Psyr_2483	0.72	-3.8
2,883,011	+		Psyr_2483	0.72	-0.8
2,883,012	-		Psyr_2483	0.72	-1.5
2,883,012	-		Psyr_2483	0.72	-0.3
2,883,012	-		Psyr_2483	0.72	+0.5
2,883,012	-		Psyr_2483	0.72	-0.5
2,883,012	-		Psyr_2483	0.72	-3.5
2,883,012	-		Psyr_2483	0.72	-1.8
2,883,383	+		Psyr_2483	0.84	-2.6
2,883,383	+		Psyr_2483	0.84	-3.2
2,883,383	+		Psyr_2483	0.84	+1.5
2,883,383	+		Psyr_2483	0.84	-2.7
2,883,383	+		Psyr_2483	0.84	-4.1
2,883,383	+		Psyr_2483	0.84	-2.7
2,883,383	+		Psyr_2483	0.84	-2.7
2,883,383	+				+1.5
2,883,383	+		Psyr_2483	0.84	-1.4
2,883,384	-		Psyr_2483	0.84	-2.1
2,883,384	-		Psyr_2483	0.84	-2.8
2,883,384	-		Psyr_2483	0.84	-3.1
2,883,384	-		Psyr_2483	0.84	-3.2
2,883,384	-		Psyr_2483	0.84	-2.8
2,883,384	-		Psyr_2483	0.84	-0.9
2,883,384	-		Psyr_2483	0.84	-1.1
2,883,384	-		Psyr_2483	0.84	+0.1
2,883,384	-		Psyr_2483	0.84	-0.5
2,883,384	-		Psyr_2483	0.84	-2.1
2,883,405	-		Psyr_2483	0.85	-3.0
2,883,413	+		Psyr_2483	0.85	-2.1
2,883,413	+		Psyr_2483	0.85	-1.1
2,883,413	+		Psyr_2483	0.85	-2.8
2,883,413	+		Psyr_2483	0.85	-3.2
2,883,414	-		Psyr_2483	0.85	-2.3
2,883,414	-		Psyr_2483	0.85	-2.0
2,883,414	-		Psyr_2483	0.85	-2.1
2,883,414	-		Psyr_2483	0.85	-2.7
2,883,414	-		Psyr_2483	0.85	-1.1
2,883,414	-		Psyr_2483	0.85	-3.0
2,883,414	-		Psyr_2483	0.85	-3.5
2,883,414	-		Psyr_2483	0.85	-2.3
2,883,414	-		Psyr_2483	0.85	-2.5
2,883,414	-		Psyr_2483	0.85	-1.2
2,883,414	-		Psyr_2483	0.85	-2.4
2,883,623	+				-2.9
2,883,624	-				-4.3
2,883,624	-				-3.4
2,883,806	+				-3.2
2,883,807	-				-2.5
2,883,807	-				-1.8
2,883,807	-				+0.5
2,883,812	+				-1.8
2,883,812	+				-2.8
2,883,813	-				+0.1
2,884,267	+		Psyr_2484	0.12	-3.4
2,884,268	-		Psyr_2484	0.12	-1.1
2,884,268	-		Psyr_2484	0.12	-3.7
2,884,346	-		Psyr_2484	0.15	-2.7
2,884,520	+		Psyr_2484	0.20	-2.5
2,884,520	+		Psyr_2484	0.20	-3.0
2,884,520	+		Psyr_2484	0.20	-3.1
2,884,521	-		Psyr_2484	0.21	-2.7
2,884,557	+		Psyr_2484	0.22	-0.2
2,884,557	+		Psyr_2484	0.22	-1.2
2,884,558	-		Psyr_2484	0.22	-0.5
2,884,603	+		Psyr_2484	0.23	-2.1
2,884,624	+		Psyr_2484	0.24	-2.2
2,884,706	-		Psyr_2484	0.26	-2.5
2,884,706	-		Psyr_2484	0.26	-2.7
2,884,706	-		Psyr_2484	0.26	+1.1
2,885,277	+		Psyr_2484	0.45	-2.9
2,885,278	-		Psyr_2484	0.45	-2.3
2,885,515	+		Psyr_2484	0.53	-3.6
2,885,515	+		Psyr_2484	0.53	-3.3
2,885,515	+		Psyr_2484	0.53	-2.7
2,885,515	+		Psyr_2484	0.53	-1.3
2,885,516	-		Psyr_2484	0.53	-1.8
2,885,516	-		Psyr_2484	0.53	-0.8
2,885,516	-		Psyr_2484	0.53	-1.1
2,885,875	+		Psyr_2484	0.64	-2.6
2,885,875	+		Psyr_2484	0.64	-0.7
2,885,881	+		Psyr_2484	0.64	-4.6
2,885,881	+		Psyr_2484	0.64	-1.8
2,885,881	+		Psyr_2484	0.64	-0.8
2,885,882	-		Psyr_2484	0.64	-3.2
2,886,085	+		Psyr_2484	0.71	-2.3
2,886,112	+		Psyr_2484	0.72	-1.6
2,886,112	+		Psyr_2484	0.72	-1.3
2,886,112	+		Psyr_2484	0.72	-3.2
2,886,112	+		Psyr_2484	0.72	-3.2
2,886,112	+		Psyr_2484	0.72	-2.0
2,886,112	+		Psyr_2484	0.72	-3.5
2,886,112	+		Psyr_2484	0.72	-0.9
2,886,112	+		Psyr_2484	0.72	-2.8
2,886,113	-		Psyr_2484	0.72	-3.0
2,886,113	-		Psyr_2484	0.72	-2.7
2,886,113	-		Psyr_2484	0.72	-2.2
2,886,113	-		Psyr_2484	0.72	-3.7
2,886,113	-		Psyr_2484	0.72	+0.7
2,886,113	-		Psyr_2484	0.72	-2.7
2,886,160	+		Psyr_2484	0.73	-0.1
2,886,485	-		Psyr_2484	0.84	-3.2
2,886,514	+		Psyr_2484	0.85	-3.4
2,886,515	-		Psyr_2484	0.85	-3.0
2,886,515	-		Psyr_2484	0.85	-4.4
2,886,515	-		Psyr_2484	0.85	-3.1
2,886,515	-		Psyr_2484	0.85	-0.5
2,886,515	-		Psyr_2484	0.85	-3.1
2,886,580	+		Psyr_2484	0.87	-1.5
2,886,580	+		Psyr_2484	0.87	-0.8
2,886,580	+		Psyr_2484	0.87	-0.5
2,886,580	+		Psyr_2484	0.87	-1.1
2,886,581	-		Psyr_2484	0.87	-2.4
2,886,581	-		Psyr_2484	0.87	-3.2
2,886,581	-		Psyr_2484	0.87	-2.6
2,886,581	-		Psyr_2484	0.87	-3.8
2,886,581	-		Psyr_2484	0.87	-2.0
2,886,581	-		Psyr_2484	0.87	+0.2
2,886,581	-		Psyr_2484	0.87	-3.7
2,886,581	-		Psyr_2484	0.87	-0.5
2,886,581	-		Psyr_2484	0.87	-0.7
2,886,581	-		Psyr_2484	0.87	-3.6
2,886,581	-		Psyr_2484	0.87	-1.6
2,886,584	+		Psyr_2484	0.87	-3.0
2,886,584	+		Psyr_2484	0.87	-1.8
2,886,584	+		Psyr_2484	0.87	-1.5
2,886,585	-		Psyr_2484	0.87	-2.8
2,886,585	-		Psyr_2484	0.87	-2.3
2,886,889	+				+2.1
2,886,890	-				-0.5
2,886,890	-				-2.1
2,886,907	+				-3.4
2,886,913	+				-2.0
2,886,987	-				-1.1
2,887,093	-				-3.1
2,887,198	-		Psyr_2485	0.14	-2.8
2,887,198	-		Psyr_2485	0.14	-2.3
2,887,263	+		Psyr_2485	0.19	-1.8
2,887,416	+		Psyr_2485	0.29	-3.0
2,887,417	-		Psyr_2485	0.29	-0.9
2,887,564	-		Psyr_2485	0.39	-1.5
2,887,564	-		Psyr_2485	0.39	-2.3
2,887,954	-		Psyr_2485	0.66	-2.8