Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2463

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,850,895	-		Psyr_2462	0.79	-0.8
2,850,967	+		Psyr_2462	0.84	-1.2
2,850,968	-		Psyr_2462	0.84	-0.4
2,851,003	-		Psyr_2462	0.86	+0.9
2,851,103	+				-1.0
2,851,103	+				+1.5
2,851,103	+				+0.5
2,851,103	+				-1.8
2,851,103	+				-1.0
2,851,103	+				-0.9
2,851,164	-				+1.7
2,851,231	+				-1.1
2,851,231	+				+0.5
2,851,232	-				+0.5
2,851,232	-				+0.1
2,851,235	+				-0.1
2,851,235	+				-1.1
2,851,235	+				+0.5
2,851,235	+				+0.4
2,851,235	+				-0.5
2,851,235	+				-0.1
2,851,235	+				-0.2
2,851,235	+				-1.2
2,851,235	+				+1.1
2,851,235	+				-1.4
2,851,235	+				-0.0
2,851,235	+				-0.9
2,851,235	+				+2.8
2,851,235	+				+0.3
2,851,235	+				+0.5
2,851,235	+				-0.9
2,851,236	-				-0.8
2,851,236	-				+0.0
2,851,236	-				+0.1
2,851,236	-				+0.8
2,851,236	-				+0.2
2,851,236	-				-1.0
2,851,236	-				-1.4
2,851,236	-				-0.4
2,851,236	-				-1.4
2,851,236	-				+0.1
2,851,236	-				-0.4
2,851,236	-				+0.8
2,851,236	-				+0.7
2,851,239	+				-0.6
2,851,239	+				-0.5
2,851,239	+				+0.0
2,851,239	+				-0.8
2,851,239	+				-0.5
2,851,239	+				-0.7
2,851,239	+				-1.5
2,851,239	+				+1.3
2,851,239	+				+0.8
2,851,239	+				+1.1
2,851,240	-				-1.0
2,851,240	-				+0.2
2,851,240	-				+0.5
2,851,240	-				-0.6
2,851,240	-				+0.2
2,851,240	-				-0.8
2,851,240	-				+0.8
2,851,240	-				+0.3
2,851,240	-				+0.1
2,851,240	-				+1.8
2,851,240	-				+0.5
2,851,240	-				-0.5
2,851,240	-				-2.1
2,851,240	-				-0.0
2,851,241	+				+1.6
2,851,241	+				-0.4
2,851,241	+				-0.7
2,851,241	+				-0.0
2,851,241	+				-2.3
2,851,241	+				-1.3
2,851,241	+				-0.2
2,851,241	+				-0.5
2,851,241	+				-1.5
2,851,241	+				+1.5
2,851,241	+				+1.3
2,851,241	+				-0.7
2,851,241	+				+0.2
2,851,241	+				+0.0
2,851,242	-				-0.9
2,851,242	-				-1.2
2,851,242	-				-0.1
2,851,242	-				+2.5
2,851,242	-				-1.0
2,851,242	-				-2.2
2,851,242	-				-2.8
2,851,242	-				-0.7
2,851,242	-				+0.1
2,851,242	-				-0.7
2,851,461	+				-0.4
2,851,495	-				+1.1
2,851,495	-				+0.6
2,851,495	-				-0.7
2,851,638	+				-1.3
2,851,638	+				-0.2
2,851,639	-				+0.9
2,851,660	-				-0.9
2,851,794	-				+0.5
2,851,806	+				+1.9
2,851,807	-				+0.5
2,851,807	-				+0.9
2,851,807	-				+0.5
2,851,807	-				-0.1
2,851,807	-				-0.1
2,851,807	-				+0.7
2,851,807	-				-0.2
2,851,807	-				+0.1
2,851,807	-				-1.7
2,851,822	+				+0.4
2,851,823	-				-0.6
2,851,823	-				+0.5
2,851,966	+		Psyr_2463	0.16	-0.6
2,851,966	+		Psyr_2463	0.16	+0.5
2,851,966	+		Psyr_2463	0.16	+1.0
2,851,967	-		Psyr_2463	0.16	+1.2
2,851,971	+		Psyr_2463	0.16	-0.5
2,851,971	+		Psyr_2463	0.16	+2.0
2,851,971	+		Psyr_2463	0.16	+1.4
2,851,972	-		Psyr_2463	0.16	+0.1
2,851,972	-		Psyr_2463	0.16	+0.5
2,851,972	-		Psyr_2463	0.16	-0.2
2,851,972	-		Psyr_2463	0.16	+0.4
2,852,044	-		Psyr_2463	0.23	+0.8
2,852,044	-		Psyr_2463	0.23	-0.2
2,852,090	+		Psyr_2463	0.27	-0.7
2,852,090	+		Psyr_2463	0.27	-0.7
2,852,090	+		Psyr_2463	0.27	-0.9
2,852,090	+		Psyr_2463	0.27	+0.4
2,852,091	-		Psyr_2463	0.27	+1.3
2,852,091	-		Psyr_2463	0.27	+0.4
2,852,091	-		Psyr_2463	0.27	+0.9
2,852,091	-		Psyr_2463	0.27	+0.0
2,852,091	-		Psyr_2463	0.27	+1.7
2,852,091	-		Psyr_2463	0.27	+0.8
2,852,091	-		Psyr_2463	0.27	+1.6
2,852,386	+		Psyr_2463	0.54	+0.7
2,852,387	-		Psyr_2463	0.54	-0.7
2,852,387	-		Psyr_2463	0.54	-0.1
2,852,677	-		Psyr_2463	0.80	-1.2
2,852,979	+				+0.2
2,852,980	-				+1.3
2,853,022	-				+0.0
2,853,225	+				-0.2
2,853,225	+				+0.5
2,853,225	+				-0.7
2,853,225	+				+2.1
2,853,226	-				+2.1
2,853,226	-				-0.2
2,853,226	-				+0.7
2,853,226	-				-0.5
2,853,226	-				+3.8
2,853,282	+		Psyr_2464	0.10	-0.5
2,853,366	+				+1.5
2,853,367	-		Psyr_2464	0.12	+1.3
2,853,367	-		Psyr_2464	0.12	+1.2
2,853,388	-		Psyr_2464	0.13	+0.7
2,853,444	+		Psyr_2464	0.14	-2.1
2,853,445	-		Psyr_2464	0.14	+2.4
2,853,570	+		Psyr_2464	0.18	+0.1
2,853,571	-		Psyr_2464	0.18	-0.5
2,853,684	+		Psyr_2464	0.21	+1.0
2,853,856	-		Psyr_2464	0.26	+0.1