Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2392

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,773,152	+				+0.9
2,773,153	-				+2.5
2,773,180	-				-0.8
2,773,180	-				+1.3
2,773,182	+				-1.5
2,773,182	+				+0.8
2,773,182	+				+0.1
2,773,182	+				-0.2
2,773,182	+				-0.5
2,773,182	+				-0.5
2,773,182	+				-1.2
2,773,183	-				+0.6
2,773,183	-				-0.3
2,773,183	-				-3.2
2,773,183	-				+0.1
2,773,183	-				+0.2
2,773,183	-				-0.3
2,773,183	-				+0.5
2,773,652	+		Psyr_2391	0.51	-0.8
2,773,653	-		Psyr_2391	0.51	+1.3
2,773,721	+		Psyr_2391	0.58	+0.5
2,773,721	+		Psyr_2391	0.58	+0.5
2,773,722	-		Psyr_2391	0.58	+0.5
2,773,919	+		Psyr_2391	0.79	-1.0
2,773,919	+		Psyr_2391	0.79	+1.7
2,773,919	+		Psyr_2391	0.79	+0.5
2,773,919	+		Psyr_2391	0.79	-0.7
2,773,919	+		Psyr_2391	0.79	+1.7
2,773,919	+		Psyr_2391	0.79	+2.8
2,773,920	-		Psyr_2391	0.79	+0.0
2,773,920	-		Psyr_2391	0.79	+0.2
2,773,920	-		Psyr_2391	0.79	-0.4
2,773,920	-		Psyr_2391	0.79	-0.7
2,773,920	-		Psyr_2391	0.79	+0.1
2,773,920	-		Psyr_2391	0.79	+1.3
2,773,923	+		Psyr_2391	0.79	+0.3
2,773,923	+		Psyr_2391	0.79	+1.2
2,773,923	+		Psyr_2391	0.79	+0.5
2,773,923	+		Psyr_2391	0.79	+1.2
2,773,924	-		Psyr_2391	0.79	+0.1
2,773,924	-		Psyr_2391	0.79	-0.1
2,773,924	-		Psyr_2391	0.79	-0.3
2,773,924	-		Psyr_2391	0.79	-0.9
2,773,924	-		Psyr_2391	0.79	-2.4
2,773,924	-		Psyr_2391	0.79	-1.1
2,773,924	-		Psyr_2391	0.79	+1.8
2,773,924	-		Psyr_2391	0.79	+0.8
2,774,123	+				+1.1
2,774,123	+				-0.9
2,774,123	+				-1.1
2,774,123	+				-0.3
2,774,124	-				+1.3
2,774,197	+		Psyr_2392	0.15	-1.7
2,774,197	+		Psyr_2392	0.15	-1.9
2,774,197	+		Psyr_2392	0.15	-2.1
2,774,198	-		Psyr_2392	0.15	+0.5
2,774,198	-		Psyr_2392	0.15	-0.8
2,774,198	-		Psyr_2392	0.15	+0.4
2,774,198	-		Psyr_2392	0.15	+0.8
2,774,198	-		Psyr_2392	0.15	-1.1
2,774,202	+		Psyr_2392	0.15	-0.1
2,774,202	+		Psyr_2392	0.15	-0.3
2,774,203	-		Psyr_2392	0.16	+0.5
2,774,203	-		Psyr_2392	0.16	+0.9
2,774,203	-		Psyr_2392	0.16	+1.5
2,774,203	-		Psyr_2392	0.16	-0.4
2,774,388	+		Psyr_2392	0.45	-1.4
2,774,559	+		Psyr_2392	0.73	-0.5
2,774,560	-		Psyr_2392	0.73	-1.6
2,774,560	-		Psyr_2392	0.73	+0.0
2,774,718	+				+0.6
2,774,718	+				-0.7
2,774,718	+				-0.9
2,774,719	-				-0.1
2,774,719	-				-0.3
2,774,719	-				+0.0
2,774,719	-				+1.2
2,774,740	+				-1.0
2,774,883	-				+1.8
2,774,883	-				-0.9
2,775,022	+		Psyr_2393	0.26	-0.2
2,775,023	-		Psyr_2393	0.26	-0.2
2,775,282	+		Psyr_2393	0.70	-0.8
2,775,283	-		Psyr_2393	0.70	+0.5
2,775,283	-		Psyr_2393	0.70	-0.3
2,775,390	+		Psyr_2393	0.89	+1.2
2,775,391	-		Psyr_2393	0.89	+0.5
2,775,411	+				-1.0
2,775,411	+				+1.2
2,775,412	-				+0.9
2,775,412	-				+0.3
2,775,412	-				-0.8
2,775,413	+				+0.1
2,775,413	+				-0.7
2,775,414	-				-0.0
2,775,603	+				-1.0
2,775,604	-				+0.4
2,775,675	+				-0.9
2,775,675	+				-0.6
2,775,675	+				-0.8
2,775,676	-				-1.1
2,775,676	-				-0.1