Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2379

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,757,479	+				+0.8
2,757,480	-				-0.7
2,757,480	-				-0.1
2,757,480	-				-0.5
2,757,664	+				-0.5
2,757,665	-				+0.3
2,757,665	-				+0.5
2,757,665	-				+0.3
2,757,666	+				-0.4
2,757,666	+				-0.2
2,757,737	+				-0.9
2,757,928	+		Psyr_2378	0.32	+0.1
2,758,219	+		Psyr_2378	0.69	+0.4
2,758,219	+		Psyr_2378	0.69	+0.5
2,758,220	-		Psyr_2378	0.69	-0.4
2,758,220	-		Psyr_2378	0.69	+0.8
2,758,220	-		Psyr_2378	0.69	+0.3
2,758,220	-		Psyr_2378	0.69	-0.1
2,758,220	-		Psyr_2378	0.69	+1.0
2,758,238	+		Psyr_2378	0.72	-0.5
2,758,239	-		Psyr_2378	0.72	-0.2
2,758,239	-		Psyr_2378	0.72	-0.2
2,758,352	+		Psyr_2378	0.86	-2.3
2,758,353	-		Psyr_2378	0.86	-0.9
2,758,470	+				-0.5
2,758,471	-				+0.0
2,758,852	-		Psyr_2379	0.29	+0.3
2,759,061	+		Psyr_2379	0.45	-0.9
2,759,061	+		Psyr_2379	0.45	+0.5
2,759,061	+		Psyr_2379	0.45	+0.5
2,759,061	+		Psyr_2379	0.45	+0.4
2,759,061	+		Psyr_2379	0.45	-0.5
2,759,062	-		Psyr_2379	0.45	-0.3
2,759,062	-		Psyr_2379	0.45	-1.7
2,759,062	-		Psyr_2379	0.45	+0.8
2,759,062	-		Psyr_2379	0.45	+2.1
2,759,065	+		Psyr_2379	0.45	-0.1
2,759,065	+		Psyr_2379	0.45	+0.5
2,759,065	+		Psyr_2379	0.45	+2.5
2,759,065	+		Psyr_2379	0.45	+0.3
2,759,065	+		Psyr_2379	0.45	+0.5
2,759,066	-		Psyr_2379	0.45	+0.3
2,759,066	-		Psyr_2379	0.45	+1.5
2,759,066	-		Psyr_2379	0.45	+1.2
2,759,066	-		Psyr_2379	0.45	+0.5
2,759,066	-		Psyr_2379	0.45	+3.7
2,759,066	-		Psyr_2379	0.45	+0.2
2,759,066	-		Psyr_2379	0.45	+0.6
2,759,066	-		Psyr_2379	0.45	-0.2
2,759,066	-		Psyr_2379	0.45	-2.2
2,759,111	-		Psyr_2379	0.48	+0.8
2,759,176	+		Psyr_2379	0.53	+0.7
2,759,176	+		Psyr_2379	0.53	+0.5
2,759,177	-		Psyr_2379	0.53	+1.0
2,759,440	+		Psyr_2379	0.73	-1.7
2,759,440	+		Psyr_2379	0.73	+1.2
2,759,551	+		Psyr_2379	0.82	+0.3
2,759,552	-		Psyr_2379	0.82	+1.1
2,759,578	+		Psyr_2379	0.84	+0.2
2,759,578	+		Psyr_2379	0.84	+0.1
2,759,810	-				-1.3
2,759,810	-				-0.1
2,759,912	+				+1.1
2,760,004	+				-0.6
2,760,005	-				-1.6
2,760,182	-		Psyr_2380	0.77	-0.9
2,760,182	-		Psyr_2380	0.77	+0.2
2,760,189	+		Psyr_2380	0.79	+0.5
2,760,189	+		Psyr_2380	0.79	-0.2
2,760,190	-		Psyr_2380	0.80	+0.5
2,760,204	+		Psyr_2380	0.86	+0.8
2,760,204	+		Psyr_2380	0.86	-1.1
2,760,204	+		Psyr_2380	0.86	-0.1
2,760,205	-		Psyr_2380	0.86	-0.3
2,760,205	-		Psyr_2380	0.86	-0.2
2,760,205	-		Psyr_2380	0.86	+1.4
2,760,205	-		Psyr_2380	0.86	+0.8
2,760,205	-		Psyr_2380	0.86	+0.4
2,760,205	-		Psyr_2380	0.86	-0.4
2,760,256	-				-0.6
2,760,389	+		Psyr_2381	0.12	+1.6
2,760,389	+		Psyr_2381	0.12	-0.5
2,760,502	+		Psyr_2381	0.24	-0.1
2,760,574	-		Psyr_2381	0.32	-0.6
2,760,625	-		Psyr_2381	0.37	+0.1
2,760,707	+		Psyr_2381	0.46	-0.9