Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2339

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,715,613	-				-0.5
2,715,613	-				+1.0
2,715,623	+				-0.4
2,715,623	+				-1.8
2,715,623	+				-0.4
2,715,624	-				-1.7
2,715,663	+				-2.7
2,715,663	+				+1.3
2,715,663	+				-0.1
2,715,664	-				-1.0
2,715,664	-				+0.7
2,715,664	-				-0.0
2,715,664	-				+1.0
2,715,664	-				+1.1
2,715,776	+		Psyr_2338	0.18	+0.7
2,715,776	+		Psyr_2338	0.18	-1.1
2,715,776	+		Psyr_2338	0.18	+0.9
2,715,776	+		Psyr_2338	0.18	-0.9
2,715,777	-		Psyr_2338	0.18	-1.6
2,715,777	-		Psyr_2338	0.18	+0.2
2,715,777	-		Psyr_2338	0.18	-0.2
2,715,897	+		Psyr_2338	0.35	-0.5
2,715,897	+		Psyr_2338	0.35	+0.8
2,715,897	+		Psyr_2338	0.35	-0.5
2,715,897	+		Psyr_2338	0.35	-0.1
2,715,897	+		Psyr_2338	0.35	+0.6
2,715,897	+		Psyr_2338	0.35	+0.8
2,715,898	-		Psyr_2338	0.35	+1.8
2,715,898	-		Psyr_2338	0.35	+0.1
2,715,898	-		Psyr_2338	0.35	+0.8
2,715,898	-		Psyr_2338	0.35	+0.4
2,715,898	-		Psyr_2338	0.35	-1.2
2,715,986	-		Psyr_2338	0.48	+1.4
2,716,406	+				+1.3
2,716,407	-				-1.2
2,716,442	-		Psyr_2339	0.16	-1.7
2,716,442	-		Psyr_2339	0.16	-0.3
2,716,442	-		Psyr_2339	0.16	-2.0
2,716,454	+		Psyr_2339	0.21	-0.6
2,716,454	+		Psyr_2339	0.21	+0.2
2,716,481	+		Psyr_2339	0.33	+0.3
2,716,482	-		Psyr_2339	0.34	-1.4
2,716,620	+				+0.1
2,716,621	-				+1.2
2,716,621	-				-0.2
2,716,621	-				-0.2
2,716,621	-				+1.7
2,716,621	-				+1.0
2,716,632	+				-0.1
2,716,632	+				+0.2
2,716,632	+				-0.8
2,716,632	+				+0.5
2,716,633	-				+1.3
2,716,633	-				+0.6
2,716,633	-				-0.1
2,716,633	-				+0.9
2,716,633	-				-1.1
2,716,795	+				+1.8
2,716,795	+				-0.7
2,716,796	-				+1.3
2,716,796	-				-2.1
2,717,021	+		Psyr_2340	0.69	+1.8
2,717,021	+		Psyr_2340	0.69	+0.5
2,717,021	+		Psyr_2340	0.69	+0.8
2,717,021	+		Psyr_2340	0.69	+0.3
2,717,083	-		Psyr_2340	0.86	+0.3
2,717,089	+		Psyr_2340	0.87	+0.0
2,717,089	+		Psyr_2340	0.87	-1.1
2,717,278	-				+0.5
2,717,278	-				-0.6
2,717,344	+		Psyr_2341	0.31	-0.5
2,717,345	-		Psyr_2341	0.32	-1.1
2,717,345	-		Psyr_2341	0.32	-0.0
2,717,347	+		Psyr_2341	0.32	-0.4
2,717,348	-		Psyr_2341	0.33	+0.1
2,717,348	-		Psyr_2341	0.33	+0.2
2,717,348	-		Psyr_2341	0.33	-0.6
2,717,452	+		Psyr_2341	0.70	-0.2
2,717,452	+		Psyr_2341	0.70	+1.8
2,717,452	+		Psyr_2341	0.70	-1.1
2,717,452	+		Psyr_2341	0.70	+0.8
2,717,452	+		Psyr_2341	0.70	-0.1
2,717,453	-		Psyr_2341	0.70	+0.2
2,717,453	-		Psyr_2341	0.70	-1.3
2,717,453	-		Psyr_2341	0.70	+0.7
2,717,542	-				+0.5
2,717,542	-				-0.7
2,717,628	+				-0.3
2,717,629	-				-1.7