Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2279

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,645,828	-		Psyr_2278	0.27	+1.3
2,646,146	-		Psyr_2278	0.58	-0.8
2,646,169	-		Psyr_2278	0.60	-1.5
2,646,169	-		Psyr_2278	0.60	-0.9
2,646,397	+		Psyr_2278	0.82	+1.1
2,646,434	-		Psyr_2278	0.86	-1.3
2,646,434	-		Psyr_2278	0.86	+0.3
2,646,434	-		Psyr_2278	0.86	+0.1
2,646,588	+				+0.5
2,646,588	+				-1.1
2,646,588	+				-0.3
2,646,588	+				+0.1
2,646,589	-				+0.1
2,646,597	+				-1.5
2,646,646	-				-0.5
2,646,812	-				+1.5
2,646,812	-				-0.5
2,646,813	+				+0.5
2,646,813	+				-0.5
2,646,814	-				+0.8
2,646,814	-				+0.8
2,646,814	-				+0.1
2,646,814	-				+0.3
2,646,862	+		Psyr_2279	0.22	-0.2
2,646,928	+		Psyr_2279	0.42	+0.5
2,646,928	+		Psyr_2279	0.42	+0.8
2,646,928	+		Psyr_2279	0.42	+0.5
2,646,928	+		Psyr_2279	0.42	+0.5
2,646,928	+		Psyr_2279	0.42	+2.0
2,646,929	-		Psyr_2279	0.42	+0.5
2,646,930	+		Psyr_2279	0.42	-0.0
2,646,930	+		Psyr_2279	0.42	-0.6
2,646,930	+		Psyr_2279	0.42	-1.1
2,646,931	-		Psyr_2279	0.43	+0.5
2,646,931	-		Psyr_2279	0.43	-0.1
2,646,931	-		Psyr_2279	0.43	-0.5
2,646,945	+		Psyr_2279	0.47	+0.9
2,646,945	+		Psyr_2279	0.47	+2.0
2,646,945	+		Psyr_2279	0.47	+2.4
2,646,946	-		Psyr_2279	0.47	+0.2
2,646,946	-		Psyr_2279	0.47	+0.5
2,646,946	-		Psyr_2279	0.47	+0.7
2,646,946	-		Psyr_2279	0.47	-0.3
2,647,052	+		Psyr_2279	0.79	+0.5
2,647,194	-				-0.1
2,647,408	+				-1.1
2,647,447	-				+0.4
2,647,546	+				+0.2
2,647,547	-				+0.8
2,647,547	-				+1.5
2,647,794	+		Psyr_2280	0.32	-0.8
2,647,795	-		Psyr_2280	0.32	-1.1
2,647,795	-		Psyr_2280	0.32	+0.6
2,648,088	+		Psyr_2280	0.58	+0.5