Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2031

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,354,319	-				+0.3
2,354,467	-				+0.1
2,354,467	-				+3.0
2,354,587	+		Psyr_2030	0.23	+0.2
2,354,615	-		Psyr_2030	0.27	+1.5
2,354,615	-		Psyr_2030	0.27	+0.7
2,354,672	-		Psyr_2030	0.34	-1.7
2,355,135	+				+1.0
2,355,136	-				+0.5
2,355,155	+				+1.1
2,355,253	+				+0.2
2,355,253	+				+0.5
2,355,254	-				+0.9
2,355,254	-				+1.0
2,355,254	-				+0.0
2,355,254	-				+1.4
2,355,254	-				-0.4
2,355,262	+				-0.4
2,355,262	+				-1.1
2,355,262	+				+2.6
2,355,262	+				+0.5
2,355,263	-				+0.1
2,355,263	-				-0.3
2,355,281	+				+1.9
2,355,281	+				+1.1
2,355,281	+				+1.7
2,355,281	+				+0.9
2,355,281	+				-0.3
2,355,282	-				+1.5
2,355,282	-				+0.2
2,355,282	-				+0.6
2,355,282	-				+0.3
2,355,282	-				-0.4
2,356,113	+		Psyr_2031	0.80	-0.7
2,356,113	+		Psyr_2031	0.80	-0.1
2,356,113	+		Psyr_2031	0.80	-0.0
2,356,113	+		Psyr_2031	0.80	-1.5
2,356,113	+		Psyr_2031	0.80	+0.5
2,356,114	-		Psyr_2031	0.80	-1.5
2,356,114	-		Psyr_2031	0.80	-1.2
2,356,344	+				-0.0
2,356,719	+		Psyr_2032	0.52	-0.1
2,356,719	+		Psyr_2032	0.52	-1.1
2,356,719	+		Psyr_2032	0.52	+0.2
2,356,719	+		Psyr_2032	0.52	+0.1
2,356,719	+		Psyr_2032	0.52	-0.3
2,356,719	+		Psyr_2032	0.52	+0.5
2,356,719	+		Psyr_2032	0.52	+0.6
2,356,719	+		Psyr_2032	0.52	-0.5
2,356,720	-		Psyr_2032	0.52	-0.4
2,356,720	-		Psyr_2032	0.52	+0.3
2,356,720	-		Psyr_2032	0.52	-0.2
2,356,720	-		Psyr_2032	0.52	-1.4
2,356,804	+		Psyr_2032	0.63	-0.3
2,356,804	+		Psyr_2032	0.63	+0.6
2,356,804	+		Psyr_2032	0.63	+0.9
2,356,805	-		Psyr_2032	0.63	+0.6
2,356,937	-		Psyr_2032	0.80	+1.2
2,357,065	+				-0.1
2,357,066	-				+0.2
2,357,135	+				+0.1
2,357,135	+				+0.8
2,357,136	-				-0.2
2,357,136	-				-1.4
2,357,192	+				+0.6
2,357,192	+				-0.9
2,357,193	-				+0.9
2,357,198	+				-0.9
2,357,199	-				-1.2
2,357,203	-				-0.1
2,357,203	-				-0.1
2,357,203	-				-0.5
2,357,203	-				+0.0
2,357,203	-				+3.0
2,357,253	+				+0.4