Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1941

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,213,273	+				+0.8
2,213,311	+				-2.1
2,213,313	+				-0.2
2,213,313	+				-0.8
2,213,313	+				-0.1
2,213,313	+				-0.3
2,213,314	-				-1.1
2,213,314	-				-1.5
2,214,318	+		Psyr_1941	0.20	-1.1
2,214,509	+		Psyr_1941	0.36	+0.3
2,214,685	+		Psyr_1941	0.51	-1.1
2,215,306	-				+0.6
2,215,314	+				-0.2
2,215,314	+				+1.0
2,215,314	+				+2.4
2,215,315	-				+0.5
2,215,315	-				-0.8
2,215,315	-				+0.4
2,215,315	-				-2.1
2,215,320	+				-0.9
2,215,320	+				+1.0
2,215,320	+				+1.1
2,215,320	+				-0.5
2,215,323	+				+1.2
2,215,324	-				+0.3
2,215,364	+				-0.7
2,215,372	+				+0.4
2,215,501	+				-0.5
2,215,501	+				-0.9
2,215,501	+				+0.1
2,215,502	-				-0.7
2,215,545	-		Psyr_1942	0.16	+0.0
2,215,548	+		Psyr_1942	0.17	+0.5
2,215,662	+		Psyr_1942	0.38	-0.5
2,215,689	-		Psyr_1942	0.43	+2.2
2,215,734	+		Psyr_1942	0.52	+1.4
2,215,735	-		Psyr_1942	0.52	+0.3
2,215,830	+		Psyr_1942	0.70	+0.4
2,215,831	-		Psyr_1942	0.70	+1.1
2,215,831	-		Psyr_1942	0.70	-1.1
2,215,831	-		Psyr_1942	0.70	-2.5
2,215,897	-		Psyr_1942	0.83	+0.0
2,216,195	-		Psyr_1943	0.24	-0.4