Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1796

Experiment: KB with Rifampicin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rifampicin 0.1 mg/ml
2,067,685	+				-1.5
2,067,686	-				+1.1
2,067,686	-				+0.1
2,067,686	-				-0.9
2,068,007	-		Psyr_1795	0.40	+0.4
2,068,059	+		Psyr_1795	0.46	-0.3
2,068,059	+		Psyr_1795	0.46	+0.5
2,068,059	+		Psyr_1795	0.46	+2.7
2,068,060	-		Psyr_1795	0.46	+0.8
2,068,060	-		Psyr_1795	0.46	+0.0
2,068,060	-		Psyr_1795	0.46	+1.1
2,068,060	-		Psyr_1795	0.46	-0.9
2,068,352	+		Psyr_1795	0.80	+1.0
2,068,352	+		Psyr_1795	0.80	-2.4
2,068,353	-		Psyr_1795	0.80	-1.2
2,068,467	+				+2.2
2,068,468	-				+1.1
2,068,468	-				+0.5
2,068,468	-				-0.2
2,068,592	+				-0.7
2,068,592	+				+0.6
2,068,592	+				+0.1
2,068,592	+				-0.6
2,068,593	-				+0.1
2,068,593	-				-1.0
2,068,593	-				+0.3
2,068,593	-				-0.4
2,068,593	-				-0.1
2,068,593	-				+0.0
2,068,593	-				+1.0
2,068,593	-				-0.0
2,068,593	-				+0.5
2,068,593	-				+1.1
2,068,594	+				+0.0
2,068,594	+				+1.3
2,068,594	+				-0.0
2,068,595	-				+0.3
2,068,953	+		Psyr_1796	0.74	+0.2
2,068,985	-		Psyr_1796	0.80	-1.3
2,068,985	-		Psyr_1796	0.80	-0.9
2,069,077	+				+0.9
2,069,078	-				-0.4
2,069,078	-				+0.1
2,069,078	-				-0.7
2,069,078	-				+0.2
2,069,129	+				+0.5
2,069,154	+				-0.6
2,069,155	-				-0.4
2,069,280	-				+0.7
2,069,280	-				-0.6
2,069,481	-		Psyr_1797	0.21	-1.0
2,069,481	-		Psyr_1797	0.21	+0.4
2,069,553	+		Psyr_1797	0.27	-0.5
2,069,554	-		Psyr_1797	0.27	-0.7
2,069,920	+		Psyr_1797	0.60	-1.0
2,069,920	+		Psyr_1797	0.60	+1.3
2,069,921	-		Psyr_1797	0.60	-0.9
2,069,921	-		Psyr_1797	0.60	+0.7
2,069,921	-		Psyr_1797	0.60	-0.7