Experiment: Carbenicillin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3143 and Ga0059261_3144 are separated by 106 nucleotides Ga0059261_3144 and Ga0059261_3145 are separated by 7 nucleotides
Ga0059261_3143: Ga0059261_3143 - Zn-dependent hydrolases, including glyoxylases, at 3,284,782 to 3,285,690
_3143
Ga0059261_3144: Ga0059261_3144 - Transcriptional regulator, at 3,285,797 to 3,286,666
_3144
Ga0059261_3145: Ga0059261_3145 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 3,286,674 to 3,287,798
_3145
Position (kb)
3285
3286
3287 Strain fitness (log2 ratio)
-2
-1
0
1 at 3284.834 kb on + strand at 3284.834 kb on + strand at 3285.032 kb on + strand, within Ga0059261_3143 at 3285.032 kb on + strand, within Ga0059261_3143 at 3285.032 kb on + strand, within Ga0059261_3143 at 3285.033 kb on - strand, within Ga0059261_3143 at 3285.033 kb on - strand, within Ga0059261_3143 at 3285.383 kb on + strand, within Ga0059261_3143 at 3285.383 kb on + strand, within Ga0059261_3143 at 3285.383 kb on + strand, within Ga0059261_3143 at 3285.383 kb on + strand, within Ga0059261_3143 at 3285.383 kb on + strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.384 kb on - strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.524 kb on + strand at 3285.524 kb on + strand, within Ga0059261_3143 at 3285.525 kb on - strand, within Ga0059261_3143 at 3285.525 kb on - strand, within Ga0059261_3143 at 3285.525 kb on - strand, within Ga0059261_3143 at 3285.525 kb on - strand, within Ga0059261_3143 at 3285.525 kb on - strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.527 kb on + strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.528 kb on - strand, within Ga0059261_3143 at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.581 kb on + strand at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.581 kb on + strand, within Ga0059261_3143 at 3285.582 kb on - strand, within Ga0059261_3143 at 3285.582 kb on - strand, within Ga0059261_3143 at 3285.582 kb on - strand, within Ga0059261_3143 at 3285.739 kb on + strand at 3285.739 kb on + strand at 3285.740 kb on - strand at 3285.740 kb on - strand at 3285.740 kb on - strand at 3285.768 kb on + strand at 3285.768 kb on + strand at 3285.768 kb on + strand at 3285.769 kb on - strand at 3286.055 kb on + strand, within Ga0059261_3144 at 3286.055 kb on + strand, within Ga0059261_3144 at 3286.056 kb on - strand, within Ga0059261_3144 at 3286.370 kb on + strand, within Ga0059261_3144 at 3286.371 kb on - strand, within Ga0059261_3144 at 3286.371 kb on - strand, within Ga0059261_3144
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.03 mg/ml remove 3,284,834 + -1.1 3,284,834 + -0.8 3,285,032 + Ga0059261_3143 0.28 -0.3 3,285,032 + Ga0059261_3143 0.28 -0.6 3,285,032 + Ga0059261_3143 0.28 -0.6 3,285,033 - Ga0059261_3143 0.28 +0.3 3,285,033 - Ga0059261_3143 0.28 -2.2 3,285,383 + Ga0059261_3143 0.66 -0.3 3,285,383 + Ga0059261_3143 0.66 -0.8 3,285,383 + Ga0059261_3143 0.66 -1.2 3,285,383 + Ga0059261_3143 0.66 -1.0 3,285,383 + Ga0059261_3143 0.66 -1.0 3,285,384 - Ga0059261_3143 0.66 -1.0 3,285,384 - Ga0059261_3143 0.66 -0.9 3,285,384 - Ga0059261_3143 0.66 +0.6 3,285,384 - Ga0059261_3143 0.66 -0.4 3,285,384 - Ga0059261_3143 0.66 -0.4 3,285,384 - Ga0059261_3143 0.66 -1.0 3,285,524 + Ga0059261_3143 0.82 -0.9 3,285,524 + Ga0059261_3143 0.82 -0.9 3,285,524 + Ga0059261_3143 0.82 -1.3 3,285,524 + Ga0059261_3143 0.82 +1.0 3,285,524 + Ga0059261_3143 0.82 -1.8 3,285,524 + Ga0059261_3143 0.82 -0.3 3,285,524 + Ga0059261_3143 0.82 -1.1 3,285,524 + Ga0059261_3143 0.82 -0.8 3,285,524 + Ga0059261_3143 0.82 +0.4 3,285,524 + Ga0059261_3143 0.82 -0.6 3,285,524 + +0.0 3,285,524 + Ga0059261_3143 0.82 -0.3 3,285,525 - Ga0059261_3143 0.82 -0.1 3,285,525 - Ga0059261_3143 0.82 -1.3 3,285,525 - Ga0059261_3143 0.82 -0.1 3,285,525 - Ga0059261_3143 0.82 -0.8 3,285,525 - Ga0059261_3143 0.82 -1.3 3,285,527 + Ga0059261_3143 0.82 -0.8 3,285,527 + Ga0059261_3143 0.82 -0.3 3,285,527 + Ga0059261_3143 0.82 +0.3 3,285,527 + Ga0059261_3143 0.82 -2.4 3,285,527 + Ga0059261_3143 0.82 -0.4 3,285,527 + Ga0059261_3143 0.82 -1.3 3,285,527 + Ga0059261_3143 0.82 -0.5 3,285,527 + Ga0059261_3143 0.82 -0.3 3,285,528 - Ga0059261_3143 0.82 -1.4 3,285,528 - Ga0059261_3143 0.82 -0.3 3,285,528 - Ga0059261_3143 0.82 -1.0 3,285,528 - Ga0059261_3143 0.82 -1.2 3,285,528 - Ga0059261_3143 0.82 -0.8 3,285,528 - Ga0059261_3143 0.82 -0.8 3,285,528 - Ga0059261_3143 0.82 -0.7 3,285,528 - Ga0059261_3143 0.82 -0.6 3,285,528 - Ga0059261_3143 0.82 -0.6 3,285,528 - Ga0059261_3143 0.82 +1.6 3,285,528 - Ga0059261_3143 0.82 -1.2 3,285,528 - Ga0059261_3143 0.82 -0.8 3,285,581 + Ga0059261_3143 0.88 -0.4 3,285,581 + Ga0059261_3143 0.88 -1.0 3,285,581 + +0.0 3,285,581 + Ga0059261_3143 0.88 +0.5 3,285,581 + Ga0059261_3143 0.88 -1.7 3,285,581 + Ga0059261_3143 0.88 -0.4 3,285,581 + Ga0059261_3143 0.88 -0.3 3,285,582 - Ga0059261_3143 0.88 -0.9 3,285,582 - Ga0059261_3143 0.88 -0.6 3,285,582 - Ga0059261_3143 0.88 -0.3 3,285,739 + -0.5 3,285,739 + +0.1 3,285,740 - -0.6 3,285,740 - -0.2 3,285,740 - -1.0 3,285,768 + -0.4 3,285,768 + -0.3 3,285,768 + -2.3 3,285,769 - -0.4 3,286,055 + Ga0059261_3144 0.30 -0.2 3,286,055 + Ga0059261_3144 0.30 -1.6 3,286,056 - Ga0059261_3144 0.30 +0.3 3,286,370 + Ga0059261_3144 0.66 -1.2 3,286,371 - Ga0059261_3144 0.66 +0.4 3,286,371 - Ga0059261_3144 0.66 +0.0
Or see this region's nucleotide sequence