Experiment: Carbenicillin 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3123 and Ga0059261_3124 overlap by 4 nucleotides Ga0059261_3124 and Ga0059261_3125 overlap by 1 nucleotides Ga0059261_3125 and Ga0059261_3126 overlap by 4 nucleotides
Ga0059261_3123: Ga0059261_3123 - N-acetyl sugar amidotransferase, at 3,263,359 to 3,264,483
_3123
Ga0059261_3124: Ga0059261_3124 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 3,264,480 to 3,265,094
_3124
Ga0059261_3125: Ga0059261_3125 - Imidazoleglycerol-phosphate synthase, at 3,265,094 to 3,265,876
_3125
Ga0059261_3126: Ga0059261_3126 - Predicted dehydrogenases and related proteins, at 3,265,873 to 3,267,996
_3126
Position (kb)
3264
3265
3266 Strain fitness (log2 ratio)
-2
-1
0
1 at 3264.845 kb on + strand, within Ga0059261_3124 at 3264.915 kb on + strand, within Ga0059261_3124 at 3264.930 kb on + strand, within Ga0059261_3124 at 3264.930 kb on + strand, within Ga0059261_3124 at 3264.930 kb on + strand, within Ga0059261_3124 at 3264.930 kb on + strand, within Ga0059261_3124 at 3264.930 kb on + strand, within Ga0059261_3124 at 3264.933 kb on + strand, within Ga0059261_3124 at 3264.933 kb on + strand, within Ga0059261_3124 at 3264.933 kb on + strand, within Ga0059261_3124 at 3264.933 kb on + strand at 3264.933 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3264.978 kb on + strand, within Ga0059261_3124 at 3265.175 kb on + strand, within Ga0059261_3125 at 3265.175 kb on + strand, within Ga0059261_3125 at 3265.204 kb on + strand, within Ga0059261_3125 at 3265.643 kb on + strand, within Ga0059261_3125 at 3265.643 kb on + strand, within Ga0059261_3125
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.03 mg/ml remove 3,264,845 + Ga0059261_3124 0.59 -0.8 3,264,915 + Ga0059261_3124 0.71 -1.3 3,264,930 + Ga0059261_3124 0.73 -1.3 3,264,930 + Ga0059261_3124 0.73 -0.2 3,264,930 + Ga0059261_3124 0.73 -0.6 3,264,930 + Ga0059261_3124 0.73 -0.9 3,264,930 + Ga0059261_3124 0.73 +0.0 3,264,933 + Ga0059261_3124 0.74 -2.2 3,264,933 + Ga0059261_3124 0.74 +0.2 3,264,933 + Ga0059261_3124 0.74 -1.3 3,264,933 + +0.6 3,264,933 + Ga0059261_3124 0.74 -0.4 3,264,978 + Ga0059261_3124 0.81 -1.4 3,264,978 + Ga0059261_3124 0.81 -0.9 3,264,978 + Ga0059261_3124 0.81 +0.0 3,264,978 + Ga0059261_3124 0.81 +0.4 3,264,978 + Ga0059261_3124 0.81 -2.0 3,264,978 + Ga0059261_3124 0.81 -0.3 3,265,175 + Ga0059261_3125 0.10 +1.3 3,265,175 + Ga0059261_3125 0.10 -0.9 3,265,204 + Ga0059261_3125 0.14 +0.8 3,265,643 + Ga0059261_3125 0.70 -2.3 3,265,643 + Ga0059261_3125 0.70 -0.6
Or see this region's nucleotide sequence