Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28410 and AO356_28415 are separated by 585 nucleotides AO356_28415 and AO356_28420 are separated by 201 nucleotides AO356_28420 and AO356_28425 are separated by 33 nucleotides
AO356_28410: AO356_28410 - monooxygenase, at 6,606,774 to 6,608,018
_28410
AO356_28415: AO356_28415 - hypothetical protein, at 6,608,604 to 6,608,969
_28415
AO356_28420: AO356_28420 - hypothetical protein, at 6,609,171 to 6,609,896
_28420
AO356_28425: AO356_28425 - hypothetical protein, at 6,609,930 to 6,610,556
_28425
Position (kb)
6608
6609 Strain fitness (log2 ratio)
-1
0
1 at 6607.659 kb on + strand, within AO356_28410 at 6607.659 kb on + strand, within AO356_28410 at 6607.660 kb on - strand, within AO356_28410 at 6607.929 kb on + strand at 6607.929 kb on + strand at 6607.944 kb on - strand at 6608.185 kb on - strand at 6608.606 kb on - strand at 6608.833 kb on + strand, within AO356_28415 at 6608.833 kb on + strand, within AO356_28415 at 6608.833 kb on + strand, within AO356_28415 at 6608.866 kb on + strand, within AO356_28415 at 6608.867 kb on - strand, within AO356_28415 at 6608.867 kb on - strand, within AO356_28415 at 6608.867 kb on - strand, within AO356_28415 at 6608.986 kb on - strand at 6608.995 kb on - strand at 6609.061 kb on + strand at 6609.085 kb on + strand at 6609.181 kb on + strand at 6609.181 kb on + strand at 6609.182 kb on - strand at 6609.327 kb on + strand, within AO356_28420 at 6609.327 kb on + strand, within AO356_28420 at 6609.477 kb on + strand, within AO356_28420 at 6609.478 kb on - strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.633 kb on + strand, within AO356_28420 at 6609.634 kb on - strand, within AO356_28420 at 6609.634 kb on - strand, within AO356_28420 at 6609.634 kb on - strand, within AO356_28420 at 6609.634 kb on - strand, within AO356_28420 at 6609.654 kb on + strand, within AO356_28420 at 6609.655 kb on - strand, within AO356_28420
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 6,607,659 + AO356_28410 0.71 +1.0 6,607,659 + AO356_28410 0.71 -0.5 6,607,660 - AO356_28410 0.71 +0.1 6,607,929 + +0.2 6,607,929 + -1.1 6,607,944 - +0.0 6,608,185 - -0.1 6,608,606 - +0.5 6,608,833 + AO356_28415 0.63 +1.0 6,608,833 + AO356_28415 0.63 +0.0 6,608,833 + AO356_28415 0.63 +0.9 6,608,866 + AO356_28415 0.72 -0.6 6,608,867 - AO356_28415 0.72 +0.3 6,608,867 - AO356_28415 0.72 -0.2 6,608,867 - AO356_28415 0.72 +0.3 6,608,986 - -0.4 6,608,995 - +0.4 6,609,061 + -0.1 6,609,085 + -0.2 6,609,181 + +0.7 6,609,181 + +0.9 6,609,182 - -0.1 6,609,327 + AO356_28420 0.21 -0.6 6,609,327 + AO356_28420 0.21 -0.4 6,609,477 + AO356_28420 0.42 -0.0 6,609,478 - AO356_28420 0.42 +0.6 6,609,633 + AO356_28420 0.64 +1.3 6,609,633 + AO356_28420 0.64 +0.9 6,609,633 + AO356_28420 0.64 +0.6 6,609,633 + AO356_28420 0.64 +0.9 6,609,633 + AO356_28420 0.64 +0.5 6,609,633 + AO356_28420 0.64 -1.1 6,609,634 - AO356_28420 0.64 +0.4 6,609,634 - AO356_28420 0.64 +0.2 6,609,634 - AO356_28420 0.64 +0.1 6,609,634 - AO356_28420 0.64 +0.5 6,609,654 + AO356_28420 0.67 +0.3 6,609,655 - AO356_28420 0.67 +0.8
Or see this region's nucleotide sequence