Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25250 and AO356_25255 overlap by 13 nucleotides AO356_25255 and AO356_25260 are separated by 22 nucleotides AO356_25260 and AO356_25265 are separated by 2 nucleotides
AO356_25250: AO356_25250 - hypothetical protein, at 5,716,101 to 5,717,468
_25250
AO356_25255: AO356_25255 - FTR1 family iron permease, at 5,717,456 to 5,718,310
_25255
AO356_25260: AO356_25260 - iron transporter, at 5,718,333 to 5,718,677
_25260
AO356_25265: AO356_25265 - hypothetical protein, at 5,718,680 to 5,719,210
_25265
Position (kb) 5717
5718
5719 Strain fitness (log2 ratio) -2
-1
0
1 at 5716.905 kb on + strand, within AO356_25250 at 5717.071 kb on + strand, within AO356_25250 at 5717.254 kb on - strand, within AO356_25250 at 5717.371 kb on + strand at 5717.531 kb on + strand at 5717.623 kb on + strand, within AO356_25255 at 5717.623 kb on + strand, within AO356_25255 at 5717.656 kb on - strand, within AO356_25255 at 5717.656 kb on - strand, within AO356_25255 at 5718.155 kb on + strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.195 kb on - strand, within AO356_25255 at 5718.292 kb on + strand at 5718.292 kb on + strand at 5718.293 kb on - strand at 5718.293 kb on - strand at 5718.587 kb on - strand, within AO356_25260 at 5718.831 kb on + strand, within AO356_25265 at 5718.831 kb on + strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.832 kb on - strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5718.960 kb on + strand, within AO356_25265 at 5719.092 kb on + strand, within AO356_25265 at 5719.092 kb on + strand, within AO356_25265 at 5719.093 kb on - strand, within AO356_25265 at 5719.093 kb on - strand, within AO356_25265 at 5719.248 kb on + strand at 5719.268 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,716,905 + AO356_25250 0.59 +0.5 5,717,071 + AO356_25250 0.71 +0.4 5,717,254 - AO356_25250 0.84 -0.5 5,717,371 + -0.3 5,717,531 + +0.2 5,717,623 + AO356_25255 0.20 -1.2 5,717,623 + AO356_25255 0.20 -0.1 5,717,656 - AO356_25255 0.23 +0.3 5,717,656 - AO356_25255 0.23 -0.2 5,718,155 + AO356_25255 0.82 -0.2 5,718,195 - AO356_25255 0.86 +0.1 5,718,195 - AO356_25255 0.86 +0.4 5,718,195 - AO356_25255 0.86 +0.6 5,718,292 + -1.8 5,718,292 + +1.1 5,718,293 - -0.6 5,718,293 - +0.6 5,718,587 - AO356_25260 0.74 +0.0 5,718,831 + AO356_25265 0.28 -1.0 5,718,831 + AO356_25265 0.28 +0.5 5,718,832 - AO356_25265 0.29 +0.5 5,718,832 - AO356_25265 0.29 +0.9 5,718,832 - AO356_25265 0.29 -0.2 5,718,960 + AO356_25265 0.53 +0.2 5,718,960 + AO356_25265 0.53 -0.5 5,718,960 + AO356_25265 0.53 +0.2 5,719,092 + AO356_25265 0.78 +0.5 5,719,092 + AO356_25265 0.78 -0.6 5,719,093 - AO356_25265 0.78 +0.5 5,719,093 - AO356_25265 0.78 +0.2 5,719,248 + +0.4 5,719,268 - -0.5
Or see this region's nucleotide sequence