Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24705 and AO356_24710 are separated by 187 nucleotides AO356_24710 and AO356_24715 are separated by 330 nucleotides AO356_24715 and AO356_24720 are separated by 120 nucleotides
AO356_24705: AO356_24705 - NAD-glutamate dehydrogenase, at 5,587,205 to 5,592,073
_24705
AO356_24710: AO356_24710 - cupin, at 5,592,261 to 5,592,665
_24710
AO356_24715: AO356_24715 - antibiotic biosynthesis monooxygenase, at 5,592,996 to 5,593,289
_24715
AO356_24720: AO356_24720 - DNA-binding protein, at 5,593,410 to 5,594,843
_24720
Position (kb) 5592
5593 Strain fitness (log2 ratio) -2
-1
0
1 at 5591.315 kb on + strand, within AO356_24705 at 5591.315 kb on + strand, within AO356_24705 at 5591.315 kb on + strand, within AO356_24705 at 5591.333 kb on - strand, within AO356_24705 at 5591.585 kb on + strand, within AO356_24705 at 5591.595 kb on - strand at 5591.654 kb on + strand at 5591.654 kb on + strand at 5591.723 kb on + strand at 5591.723 kb on + strand at 5591.723 kb on + strand at 5592.005 kb on + strand at 5592.005 kb on + strand at 5592.006 kb on - strand at 5592.006 kb on - strand at 5592.006 kb on - strand at 5592.250 kb on + strand at 5592.251 kb on - strand at 5592.262 kb on + strand at 5592.262 kb on + strand at 5592.263 kb on - strand at 5592.263 kb on - strand at 5592.263 kb on - strand at 5592.263 kb on - strand at 5592.403 kb on + strand, within AO356_24710 at 5592.403 kb on + strand, within AO356_24710 at 5592.403 kb on + strand, within AO356_24710 at 5592.404 kb on - strand, within AO356_24710 at 5592.457 kb on + strand, within AO356_24710 at 5592.457 kb on + strand, within AO356_24710 at 5592.457 kb on + strand, within AO356_24710 at 5592.512 kb on - strand, within AO356_24710 at 5592.512 kb on - strand, within AO356_24710 at 5592.610 kb on + strand, within AO356_24710 at 5592.652 kb on + strand at 5592.653 kb on - strand at 5592.726 kb on - strand at 5593.166 kb on + strand, within AO356_24715 at 5593.167 kb on - strand, within AO356_24715 at 5593.167 kb on - strand, within AO356_24715 at 5593.168 kb on + strand, within AO356_24715 at 5593.169 kb on - strand, within AO356_24715 at 5593.169 kb on - strand, within AO356_24715 at 5593.169 kb on - strand, within AO356_24715 at 5593.169 kb on - strand, within AO356_24715 at 5593.263 kb on + strand at 5593.391 kb on + strand at 5593.392 kb on - strand at 5593.540 kb on + strand at 5593.616 kb on + strand, within AO356_24720 at 5593.616 kb on + strand, within AO356_24720 at 5593.617 kb on - strand, within AO356_24720 at 5593.617 kb on - strand, within AO356_24720
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,591,315 + AO356_24705 0.84 -0.9 5,591,315 + AO356_24705 0.84 -0.4 5,591,315 + AO356_24705 0.84 -0.5 5,591,333 - AO356_24705 0.85 -0.4 5,591,585 + AO356_24705 0.90 -0.5 5,591,595 - -0.6 5,591,654 + -0.1 5,591,654 + -0.9 5,591,723 + -0.4 5,591,723 + -0.8 5,591,723 + -0.1 5,592,005 + -1.2 5,592,005 + +0.6 5,592,006 - -0.2 5,592,006 - -0.2 5,592,006 - -1.4 5,592,250 + -1.2 5,592,251 - +0.1 5,592,262 + +0.1 5,592,262 + +0.3 5,592,263 - +0.4 5,592,263 - +0.2 5,592,263 - +0.3 5,592,263 - +0.3 5,592,403 + AO356_24710 0.35 +0.2 5,592,403 + AO356_24710 0.35 +1.1 5,592,403 + AO356_24710 0.35 -0.3 5,592,404 - AO356_24710 0.35 -0.1 5,592,457 + AO356_24710 0.48 -0.5 5,592,457 + AO356_24710 0.48 -0.9 5,592,457 + AO356_24710 0.48 -0.5 5,592,512 - AO356_24710 0.62 +0.2 5,592,512 - AO356_24710 0.62 +0.3 5,592,610 + AO356_24710 0.86 -0.1 5,592,652 + +0.8 5,592,653 - -0.0 5,592,726 - +0.6 5,593,166 + AO356_24715 0.58 -0.0 5,593,167 - AO356_24715 0.58 +0.2 5,593,167 - AO356_24715 0.58 +0.4 5,593,168 + AO356_24715 0.59 -0.4 5,593,169 - AO356_24715 0.59 -0.7 5,593,169 - AO356_24715 0.59 -2.3 5,593,169 - AO356_24715 0.59 -0.3 5,593,169 - AO356_24715 0.59 +0.1 5,593,263 + -1.2 5,593,391 + +0.6 5,593,392 - +0.3 5,593,540 + -0.2 5,593,616 + AO356_24720 0.14 -0.2 5,593,616 + AO356_24720 0.14 +0.2 5,593,617 - AO356_24720 0.14 -0.5 5,593,617 - AO356_24720 0.14 -0.1
Or see this region's nucleotide sequence