Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24685 and AO356_24690 overlap by 8 nucleotides AO356_24690 and AO356_24695 are separated by 154 nucleotides AO356_24695 and AO356_24700 are separated by 316 nucleotides
AO356_24685: AO356_24685 - 2-dehydro-3-deoxygluconokinase, at 5,583,209 to 5,584,189
_24685
AO356_24690: AO356_24690 - AP endonuclease, at 5,584,182 to 5,584,964
_24690
AO356_24695: AO356_24695 - transcriptional regulator, at 5,585,119 to 5,586,105
_24695
AO356_24700: AO356_24700 - hypothetical protein, at 5,586,422 to 5,586,775
_24700
Position (kb)
5585
5586
5587 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5584.411 kb on + strand, within AO356_24690 at 5584.411 kb on + strand, within AO356_24690 at 5584.412 kb on - strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.771 kb on - strand, within AO356_24690 at 5585.292 kb on - strand, within AO356_24695 at 5585.508 kb on + strand, within AO356_24695 at 5585.771 kb on + strand, within AO356_24695 at 5585.772 kb on - strand, within AO356_24695 at 5585.842 kb on - strand, within AO356_24695 at 5585.844 kb on - strand, within AO356_24695 at 5585.882 kb on - strand, within AO356_24695 at 5586.160 kb on + strand at 5586.160 kb on + strand at 5586.161 kb on - strand at 5586.163 kb on + strand at 5586.164 kb on - strand at 5586.294 kb on + strand at 5586.295 kb on - strand at 5586.295 kb on - strand at 5586.350 kb on + strand at 5586.350 kb on + strand at 5586.350 kb on + strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.890 kb on - strand at 5586.936 kb on + strand at 5586.936 kb on + strand at 5586.977 kb on - strand at 5587.049 kb on + strand at 5587.050 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,584,411 + AO356_24690 0.29 +0.5 5,584,411 + AO356_24690 0.29 -0.6 5,584,412 - AO356_24690 0.29 -0.4 5,584,420 + AO356_24690 0.30 +0.1 5,584,420 + AO356_24690 0.30 -0.5 5,584,420 + AO356_24690 0.30 +0.1 5,584,770 + AO356_24690 0.75 -0.3 5,584,770 + AO356_24690 0.75 -1.2 5,584,770 + AO356_24690 0.75 -0.1 5,584,770 + AO356_24690 0.75 +0.3 5,584,771 - AO356_24690 0.75 -0.8 5,585,292 - AO356_24695 0.18 -2.6 5,585,508 + AO356_24695 0.39 -1.6 5,585,771 + AO356_24695 0.66 +0.7 5,585,772 - AO356_24695 0.66 -0.4 5,585,842 - AO356_24695 0.73 +0.6 5,585,844 - AO356_24695 0.73 +1.2 5,585,882 - AO356_24695 0.77 +1.0 5,586,160 + -0.4 5,586,160 + +1.3 5,586,161 - -1.5 5,586,163 + +1.2 5,586,164 - -0.2 5,586,294 + -0.5 5,586,295 - -0.3 5,586,295 - -0.2 5,586,350 + -0.6 5,586,350 + -0.2 5,586,350 + +1.2 5,586,351 - -1.7 5,586,351 - -0.6 5,586,351 - -1.5 5,586,351 - +0.2 5,586,434 + -1.0 5,586,434 + -0.0 5,586,434 + +0.3 5,586,434 + +0.1 5,586,435 - +1.4 5,586,435 - -0.3 5,586,435 - +0.2 5,586,435 - +0.6 5,586,435 - -0.2 5,586,438 + +1.5 5,586,438 + +2.1 5,586,438 + -0.3 5,586,438 + -0.5 5,586,438 + +0.2 5,586,438 + -0.2 5,586,438 + -0.1 5,586,439 - -0.5 5,586,439 - +0.5 5,586,439 - +0.4 5,586,439 - +0.1 5,586,439 - -0.6 5,586,439 - +0.1 5,586,439 - +0.5 5,586,890 - +1.2 5,586,936 + +0.5 5,586,936 + -1.0 5,586,977 - +0.1 5,587,049 + -0.5 5,587,050 - -0.2
Or see this region's nucleotide sequence