Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24690
Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,583,270 | - | -0.3 | |||
5,583,487 | - | AO356_24685 | 0.28 | +1.1 | |
5,583,540 | + | AO356_24685 | 0.34 | +0.8 | |
5,583,540 | + | AO356_24685 | 0.34 | +0.2 | |
5,583,541 | - | AO356_24685 | 0.34 | -0.1 | |
5,583,672 | - | AO356_24685 | 0.47 | -1.1 | |
5,583,724 | + | AO356_24685 | 0.52 | -1.3 | |
5,583,725 | - | AO356_24685 | 0.53 | -0.4 | |
5,583,870 | + | AO356_24685 | 0.67 | +0.6 | |
5,583,870 | + | AO356_24685 | 0.67 | +0.6 | |
5,584,411 | + | AO356_24690 | 0.29 | +0.5 | |
5,584,411 | + | AO356_24690 | 0.29 | -0.6 | |
5,584,412 | - | AO356_24690 | 0.29 | -0.4 | |
5,584,420 | + | AO356_24690 | 0.30 | +0.1 | |
5,584,420 | + | AO356_24690 | 0.30 | -0.5 | |
5,584,420 | + | AO356_24690 | 0.30 | +0.1 | |
5,584,770 | + | AO356_24690 | 0.75 | -0.3 | |
5,584,770 | + | AO356_24690 | 0.75 | -1.2 | |
5,584,770 | + | AO356_24690 | 0.75 | -0.1 | |
5,584,770 | + | AO356_24690 | 0.75 | +0.3 | |
5,584,771 | - | AO356_24690 | 0.75 | -0.8 | |
5,585,292 | - | AO356_24695 | 0.18 | -2.6 | |
5,585,508 | + | AO356_24695 | 0.39 | -1.6 | |
5,585,771 | + | AO356_24695 | 0.66 | +0.7 | |
5,585,772 | - | AO356_24695 | 0.66 | -0.4 | |
5,585,842 | - | AO356_24695 | 0.73 | +0.6 | |
5,585,844 | - | AO356_24695 | 0.73 | +1.2 | |
5,585,882 | - | AO356_24695 | 0.77 | +1.0 |
Or see this region's nucleotide sequence