Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24445 and AO356_24450 are separated by 20 nucleotides AO356_24450 and AO356_24455 are separated by 1 nucleotides
AO356_24445: AO356_24445 - enoyl-ACP reductase, at 5,518,931 to 5,519,725
_24445
AO356_24450: AO356_24450 - microcin ABC transporter ATP-binding protein, at 5,519,746 to 5,521,356
_24450
AO356_24455: AO356_24455 - ABC transporter permease, at 5,521,358 to 5,522,377
_24455
Position (kb)
5519
5520
5521
5522 Strain fitness (log2 ratio)
-1
0
1 at 5518.747 kb on + strand at 5518.747 kb on + strand at 5518.747 kb on + strand at 5518.747 kb on + strand at 5518.747 kb on + strand at 5518.748 kb on - strand at 5518.748 kb on - strand at 5518.748 kb on - strand at 5518.921 kb on - strand at 5518.921 kb on - strand at 5519.748 kb on - strand at 5519.937 kb on - strand, within AO356_24450 at 5520.125 kb on - strand, within AO356_24450 at 5520.465 kb on - strand, within AO356_24450 at 5520.732 kb on + strand, within AO356_24450 at 5521.356 kb on + strand at 5521.677 kb on + strand, within AO356_24455 at 5521.678 kb on - strand, within AO356_24455 at 5521.809 kb on + strand, within AO356_24455 at 5521.946 kb on + strand, within AO356_24455 at 5521.954 kb on + strand, within AO356_24455 at 5522.058 kb on + strand, within AO356_24455 at 5522.073 kb on + strand, within AO356_24455 at 5522.136 kb on + strand, within AO356_24455 at 5522.137 kb on - strand, within AO356_24455 at 5522.137 kb on - strand, within AO356_24455 at 5522.148 kb on + strand, within AO356_24455 at 5522.148 kb on + strand, within AO356_24455 at 5522.148 kb on + strand, within AO356_24455 at 5522.148 kb on + strand, within AO356_24455 at 5522.148 kb on + strand, within AO356_24455 at 5522.149 kb on - strand, within AO356_24455 at 5522.214 kb on + strand, within AO356_24455 at 5522.214 kb on + strand, within AO356_24455 at 5522.230 kb on - strand, within AO356_24455 at 5522.230 kb on - strand, within AO356_24455 at 5522.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,518,747 + -1.3 5,518,747 + -0.1 5,518,747 + -0.3 5,518,747 + -0.4 5,518,747 + +0.3 5,518,748 - -0.1 5,518,748 - -0.1 5,518,748 - +0.9 5,518,921 - -1.2 5,518,921 - +1.6 5,519,748 - -0.3 5,519,937 - AO356_24450 0.12 -1.0 5,520,125 - AO356_24450 0.24 -0.2 5,520,465 - AO356_24450 0.45 -0.5 5,520,732 + AO356_24450 0.61 +0.0 5,521,356 + +0.8 5,521,677 + AO356_24455 0.31 -1.0 5,521,678 - AO356_24455 0.31 +0.0 5,521,809 + AO356_24455 0.44 +0.1 5,521,946 + AO356_24455 0.58 +0.1 5,521,954 + AO356_24455 0.58 -0.2 5,522,058 + AO356_24455 0.69 -0.1 5,522,073 + AO356_24455 0.70 -0.3 5,522,136 + AO356_24455 0.76 +0.3 5,522,137 - AO356_24455 0.76 +0.6 5,522,137 - AO356_24455 0.76 -0.7 5,522,148 + AO356_24455 0.77 -0.2 5,522,148 + AO356_24455 0.77 -0.9 5,522,148 + AO356_24455 0.77 +0.0 5,522,148 + AO356_24455 0.77 -0.1 5,522,148 + AO356_24455 0.77 +0.0 5,522,149 - AO356_24455 0.78 -0.4 5,522,214 + AO356_24455 0.84 +1.2 5,522,214 + AO356_24455 0.84 +0.2 5,522,230 - AO356_24455 0.85 -0.3 5,522,230 - AO356_24455 0.85 -0.1 5,522,279 - -0.4
Or see this region's nucleotide sequence