Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22125 and AO356_22130 are separated by 295 nucleotides AO356_22130 and AO356_22135 overlap by 2 nucleotides
AO356_22125: AO356_22125 - isocitrate dehydrogenase, at 4,952,568 to 4,954,793
_22125
AO356_22130: AO356_22130 - hypothetical protein, at 4,955,089 to 4,955,277
_22130
AO356_22135: AO356_22135 - isocitrate dehydrogenase, at 4,955,276 to 4,956,532
_22135
Position (kb)
4955
4956 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4954.146 kb on + strand, within AO356_22125 at 4954.146 kb on + strand, within AO356_22125 at 4954.147 kb on - strand, within AO356_22125 at 4954.147 kb on - strand, within AO356_22125 at 4954.275 kb on + strand, within AO356_22125 at 4954.276 kb on - strand, within AO356_22125 at 4954.333 kb on + strand, within AO356_22125 at 4954.333 kb on + strand, within AO356_22125 at 4954.334 kb on - strand, within AO356_22125 at 4954.334 kb on - strand, within AO356_22125 at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.732 kb on + strand at 4954.733 kb on - strand at 4954.767 kb on - strand at 4954.767 kb on - strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.768 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.793 kb on + strand at 4954.818 kb on + strand at 4954.819 kb on - strand at 4954.852 kb on - strand at 4954.964 kb on + strand at 4954.964 kb on + strand at 4954.965 kb on - strand at 4954.965 kb on - strand at 4954.987 kb on + strand at 4954.987 kb on + strand at 4954.987 kb on + strand at 4955.029 kb on + strand at 4955.030 kb on - strand at 4955.030 kb on - strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.031 kb on + strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.032 kb on - strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.035 kb on + strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.036 kb on - strand at 4955.039 kb on + strand at 4955.039 kb on + strand at 4955.039 kb on + strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.040 kb on - strand at 4955.065 kb on - strand at 4955.118 kb on + strand, within AO356_22130 at 4955.118 kb on + strand, within AO356_22130 at 4955.197 kb on - strand, within AO356_22130 at 4955.201 kb on + strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.202 kb on - strand, within AO356_22130 at 4955.282 kb on + strand at 4955.344 kb on + strand at 4955.344 kb on + strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.345 kb on - strand at 4955.451 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.487 kb on - strand, within AO356_22135 at 4955.513 kb on + strand, within AO356_22135 at 4955.513 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.564 kb on + strand, within AO356_22135 at 4955.565 kb on - strand, within AO356_22135 at 4955.565 kb on - strand, within AO356_22135 at 4955.628 kb on + strand, within AO356_22135 at 4955.629 kb on - strand, within AO356_22135 at 4955.629 kb on - strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.654 kb on + strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.655 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.760 kb on - strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.927 kb on + strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.928 kb on - strand, within AO356_22135 at 4955.969 kb on - strand, within AO356_22135 at 4956.167 kb on + strand, within AO356_22135 at 4956.168 kb on - strand, within AO356_22135 at 4956.168 kb on - strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.203 kb on + strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135 at 4956.204 kb on - strand, within AO356_22135
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,954,146 + AO356_22125 0.71 -0.6 4,954,146 + AO356_22125 0.71 -0.4 4,954,147 - AO356_22125 0.71 -1.4 4,954,147 - AO356_22125 0.71 -0.3 4,954,275 + AO356_22125 0.77 -0.4 4,954,276 - AO356_22125 0.77 -0.7 4,954,333 + AO356_22125 0.79 -0.7 4,954,333 + AO356_22125 0.79 -1.3 4,954,334 - AO356_22125 0.79 -2.8 4,954,334 - AO356_22125 0.79 -1.1 4,954,732 + -0.9 4,954,732 + -2.0 4,954,732 + -0.1 4,954,732 + -1.7 4,954,733 - -0.5 4,954,767 - -1.2 4,954,767 - -3.3 4,954,768 + -0.4 4,954,768 + -2.0 4,954,768 + -0.3 4,954,768 + +1.0 4,954,793 + -0.7 4,954,793 + -1.3 4,954,793 + -2.0 4,954,793 + -3.1 4,954,793 + +0.3 4,954,818 + +0.3 4,954,819 - +0.2 4,954,852 - -0.2 4,954,964 + -0.4 4,954,964 + +1.1 4,954,965 - -1.3 4,954,965 - -0.3 4,954,987 + -1.2 4,954,987 + -0.6 4,954,987 + -2.3 4,955,029 + -0.6 4,955,030 - +0.0 4,955,030 - -0.7 4,955,031 + -0.1 4,955,031 + +0.4 4,955,031 + -0.5 4,955,031 + +0.2 4,955,031 + -0.0 4,955,031 + -0.5 4,955,031 + -1.3 4,955,031 + +0.1 4,955,031 + +0.4 4,955,031 + -0.9 4,955,031 + -1.6 4,955,032 - +0.7 4,955,032 - +0.2 4,955,032 - +0.8 4,955,032 - +0.2 4,955,032 - +0.3 4,955,032 - +0.4 4,955,032 - +1.0 4,955,035 + +0.7 4,955,035 + -0.6 4,955,035 + -0.4 4,955,035 + -0.4 4,955,035 + +0.0 4,955,035 + -0.5 4,955,035 + -0.4 4,955,035 + -0.8 4,955,035 + -0.6 4,955,035 + -1.2 4,955,035 + -0.2 4,955,035 + -0.8 4,955,035 + +0.1 4,955,035 + -0.3 4,955,036 - -0.7 4,955,036 - -1.1 4,955,036 - -0.4 4,955,036 - +0.0 4,955,036 - -2.0 4,955,036 - +1.3 4,955,036 - +0.8 4,955,039 + -0.4 4,955,039 + +0.6 4,955,039 + -0.9 4,955,040 - +0.4 4,955,040 - +0.8 4,955,040 - -2.4 4,955,040 - -0.5 4,955,040 - +0.0 4,955,040 - +0.6 4,955,040 - +0.0 4,955,065 - +0.2 4,955,118 + AO356_22130 0.15 +0.0 4,955,118 + AO356_22130 0.15 +0.2 4,955,197 - AO356_22130 0.57 +0.0 4,955,201 + AO356_22130 0.59 -0.2 4,955,202 - AO356_22130 0.60 -0.3 4,955,202 - AO356_22130 0.60 -0.1 4,955,202 - AO356_22130 0.60 -0.1 4,955,282 + +0.4 4,955,344 + -0.2 4,955,344 + -0.7 4,955,345 - +0.2 4,955,345 - +0.6 4,955,345 - +0.6 4,955,345 - +0.3 4,955,345 - -0.2 4,955,451 - AO356_22135 0.14 -0.8 4,955,487 - AO356_22135 0.17 -1.1 4,955,487 - AO356_22135 0.17 -0.0 4,955,487 - AO356_22135 0.17 +0.4 4,955,513 + AO356_22135 0.19 -0.8 4,955,513 + AO356_22135 0.19 -0.2 4,955,564 + AO356_22135 0.23 +0.0 4,955,564 + AO356_22135 0.23 -0.1 4,955,564 + AO356_22135 0.23 +0.2 4,955,564 + AO356_22135 0.23 +0.4 4,955,565 - AO356_22135 0.23 -0.5 4,955,565 - AO356_22135 0.23 -0.3 4,955,628 + AO356_22135 0.28 -0.7 4,955,629 - AO356_22135 0.28 +0.2 4,955,629 - AO356_22135 0.28 +0.2 4,955,654 + AO356_22135 0.30 +0.7 4,955,654 + AO356_22135 0.30 +0.3 4,955,654 + AO356_22135 0.30 +0.3 4,955,654 + AO356_22135 0.30 -2.2 4,955,655 - AO356_22135 0.30 +0.5 4,955,655 - AO356_22135 0.30 -0.3 4,955,655 - AO356_22135 0.30 +0.7 4,955,655 - AO356_22135 0.30 -0.3 4,955,655 - AO356_22135 0.30 +0.4 4,955,655 - AO356_22135 0.30 +0.2 4,955,760 - AO356_22135 0.39 -0.3 4,955,760 - AO356_22135 0.39 +0.1 4,955,760 - AO356_22135 0.39 +0.1 4,955,760 - AO356_22135 0.39 +1.0 4,955,927 + AO356_22135 0.52 +0.6 4,955,927 + AO356_22135 0.52 -0.6 4,955,927 + AO356_22135 0.52 +0.6 4,955,927 + AO356_22135 0.52 -0.6 4,955,927 + AO356_22135 0.52 +0.8 4,955,927 + AO356_22135 0.52 -0.3 4,955,927 + AO356_22135 0.52 +0.4 4,955,927 + AO356_22135 0.52 +0.4 4,955,927 + AO356_22135 0.52 +0.8 4,955,927 + AO356_22135 0.52 -0.6 4,955,927 + AO356_22135 0.52 -0.4 4,955,928 - AO356_22135 0.52 -0.1 4,955,928 - AO356_22135 0.52 -0.3 4,955,928 - AO356_22135 0.52 -0.1 4,955,928 - AO356_22135 0.52 +1.0 4,955,928 - AO356_22135 0.52 -0.2 4,955,928 - AO356_22135 0.52 -0.3 4,955,928 - AO356_22135 0.52 -0.2 4,955,969 - AO356_22135 0.55 +0.0 4,956,167 + AO356_22135 0.71 +0.4 4,956,168 - AO356_22135 0.71 +0.9 4,956,168 - AO356_22135 0.71 +0.4 4,956,203 + AO356_22135 0.74 +0.1 4,956,203 + AO356_22135 0.74 +1.1 4,956,203 + AO356_22135 0.74 +0.1 4,956,204 - AO356_22135 0.74 +0.1 4,956,204 - AO356_22135 0.74 +0.5 4,956,204 - AO356_22135 0.74 -0.8 4,956,204 - AO356_22135 0.74 +0.3
Or see this region's nucleotide sequence