Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18475 and AO356_18480 are separated by 7 nucleotides AO356_18480 and AO356_18485 are separated by 107 nucleotides AO356_18485 and AO356_18490 are separated by 1 nucleotides AO356_18490 and AO356_18495 are separated by 87 nucleotides AO356_18495 and AO356_18500 are separated by 13 nucleotides
AO356_18475: AO356_18475 - chemotaxis protein CheY, at 4,159,577 to 4,160,254
_18475
AO356_18480: AO356_18480 - translation initiation factor 2, at 4,160,262 to 4,160,672
_18480
AO356_18485: AO356_18485 - hypothetical protein, at 4,160,780 to 4,161,079
_18485
AO356_18490: AO356_18490 - septation protein A, at 4,161,081 to 4,161,677
_18490
AO356_18495: AO356_18495 - phosphoesterase, at 4,161,765 to 4,162,628
_18495
AO356_18500: AO356_18500 - hypothetical protein, at 4,162,642 to 4,163,271
_18500
Position (kb)
4161
4162 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4160.234 kb on + strand at 4160.234 kb on + strand at 4160.234 kb on + strand at 4160.234 kb on + strand at 4160.234 kb on + strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.235 kb on - strand at 4160.240 kb on + strand at 4160.241 kb on - strand at 4160.241 kb on - strand at 4160.268 kb on + strand at 4160.269 kb on - strand at 4160.288 kb on + strand at 4160.288 kb on + strand at 4160.288 kb on + strand at 4160.288 kb on + strand at 4160.288 kb on + strand at 4160.289 kb on - strand at 4160.309 kb on + strand, within AO356_18480 at 4160.310 kb on - strand, within AO356_18480 at 4160.328 kb on + strand, within AO356_18480 at 4160.699 kb on + strand at 4160.699 kb on + strand at 4160.700 kb on - strand at 4160.726 kb on - strand at 4160.781 kb on + strand at 4160.781 kb on + strand at 4160.823 kb on + strand, within AO356_18485 at 4161.072 kb on + strand at 4161.072 kb on + strand at 4161.073 kb on - strand at 4161.073 kb on - strand at 4161.073 kb on - strand at 4161.073 kb on - strand at 4161.708 kb on + strand at 4161.709 kb on - strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.711 kb on + strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.712 kb on - strand at 4161.753 kb on + strand at 4161.754 kb on - strand at 4161.754 kb on - strand at 4161.788 kb on + strand at 4161.788 kb on + strand at 4161.789 kb on - strand at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.962 kb on + strand, within AO356_18495 at 4161.963 kb on - strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.996 kb on + strand, within AO356_18495 at 4161.997 kb on - strand, within AO356_18495 at 4162.356 kb on + strand, within AO356_18495 at 4162.357 kb on - strand, within AO356_18495 at 4162.357 kb on - strand, within AO356_18495 at 4162.398 kb on + strand, within AO356_18495 at 4162.398 kb on + strand, within AO356_18495 at 4162.399 kb on - strand, within AO356_18495 at 4162.399 kb on - strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.400 kb on + strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.401 kb on - strand, within AO356_18495 at 4162.634 kb on + strand at 4162.634 kb on + strand at 4162.634 kb on + strand at 4162.635 kb on - strand at 4162.635 kb on - strand at 4162.635 kb on - strand at 4162.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,160,234 + +0.7 4,160,234 + -0.2 4,160,234 + -1.1 4,160,234 + -0.6 4,160,234 + +0.3 4,160,235 - +0.1 4,160,235 - -0.0 4,160,235 - -0.0 4,160,235 - -0.7 4,160,235 - +0.4 4,160,235 - +0.7 4,160,235 - +0.6 4,160,240 + +0.3 4,160,241 - -0.5 4,160,241 - -0.4 4,160,268 + -0.1 4,160,269 - +1.6 4,160,288 + +0.3 4,160,288 + +0.6 4,160,288 + +0.2 4,160,288 + +1.3 4,160,288 + +0.4 4,160,289 - -1.2 4,160,309 + AO356_18480 0.11 +1.0 4,160,310 - AO356_18480 0.12 +0.2 4,160,328 + AO356_18480 0.16 +0.2 4,160,699 + -0.5 4,160,699 + -0.2 4,160,700 - -0.0 4,160,726 - +0.2 4,160,781 + +0.6 4,160,781 + -0.9 4,160,823 + AO356_18485 0.14 +2.6 4,161,072 + +0.6 4,161,072 + +0.1 4,161,073 - +0.2 4,161,073 - +0.4 4,161,073 - -1.5 4,161,073 - -1.5 4,161,708 + -0.6 4,161,709 - +0.3 4,161,711 + +0.2 4,161,711 + -2.5 4,161,711 + -0.4 4,161,711 + -0.2 4,161,711 + -0.9 4,161,711 + -0.0 4,161,711 + -2.6 4,161,711 + +0.1 4,161,711 + -1.2 4,161,712 - +2.1 4,161,712 - +2.6 4,161,712 - +1.5 4,161,712 - +1.3 4,161,712 - -0.4 4,161,712 - +1.0 4,161,712 - +0.3 4,161,712 - +1.4 4,161,712 - +0.7 4,161,753 + -0.2 4,161,754 - +0.4 4,161,754 - -0.2 4,161,788 + +1.3 4,161,788 + +1.1 4,161,789 - +0.7 4,161,962 + AO356_18495 0.23 +1.0 4,161,962 + AO356_18495 0.23 -0.3 4,161,962 + AO356_18495 0.23 +0.2 4,161,962 + AO356_18495 0.23 +1.2 4,161,963 - AO356_18495 0.23 -0.3 4,161,996 + AO356_18495 0.27 -0.5 4,161,996 + AO356_18495 0.27 -0.1 4,161,996 + AO356_18495 0.27 +1.0 4,161,997 - AO356_18495 0.27 +1.1 4,162,356 + AO356_18495 0.68 +0.2 4,162,357 - AO356_18495 0.69 +0.2 4,162,357 - AO356_18495 0.69 +0.3 4,162,398 + AO356_18495 0.73 -0.9 4,162,398 + AO356_18495 0.73 +0.8 4,162,399 - AO356_18495 0.73 +0.9 4,162,399 - AO356_18495 0.73 -0.0 4,162,400 + AO356_18495 0.73 -1.0 4,162,400 + AO356_18495 0.73 -0.5 4,162,400 + AO356_18495 0.73 -0.7 4,162,400 + AO356_18495 0.73 +1.2 4,162,401 - AO356_18495 0.74 +1.8 4,162,401 - AO356_18495 0.74 +0.1 4,162,401 - AO356_18495 0.74 +0.3 4,162,401 - AO356_18495 0.74 +0.4 4,162,401 - AO356_18495 0.74 +0.3 4,162,401 - AO356_18495 0.74 +0.9 4,162,634 + +1.6 4,162,634 + -0.2 4,162,634 + +0.2 4,162,635 - -0.2 4,162,635 - -0.1 4,162,635 - +0.6 4,162,635 - +2.0
Or see this region's nucleotide sequence