Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11730 and AO356_11735 are separated by 206 nucleotides AO356_11735 and AO356_11740 are separated by 1 nucleotides AO356_11740 and AO356_11745 are separated by 327 nucleotides AO356_11745 and AO356_11750 overlap by 8 nucleotides
AO356_11730: AO356_11730 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, at 2,656,114 to 2,657,481
_11730
AO356_11735: AO356_11735 - XRE family transcriptional regulator, at 2,657,688 to 2,658,464
_11735
AO356_11740: AO356_11740 - glucosamine--fructose-6-phosphate aminotransferase, at 2,658,466 to 2,660,298
_11740
AO356_11745: AO356_11745 - hypothetical protein, at 2,660,626 to 2,661,084
_11745
AO356_11750: AO356_11750 - toxin HipA, at 2,661,077 to 2,662,333
_11750
Position (kb)
2658
2659
2660
2661 Strain fitness (log2 ratio)
-2
-1
0
1 at 2657.479 kb on + strand at 2657.479 kb on + strand at 2657.528 kb on + strand at 2657.528 kb on + strand at 2657.528 kb on + strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.535 kb on + strand at 2657.535 kb on + strand at 2657.535 kb on + strand at 2657.536 kb on - strand at 2657.544 kb on - strand at 2657.544 kb on - strand at 2657.544 kb on - strand at 2657.702 kb on + strand at 2657.702 kb on + strand at 2657.798 kb on + strand, within AO356_11735 at 2657.916 kb on + strand, within AO356_11735 at 2657.916 kb on + strand, within AO356_11735 at 2658.230 kb on + strand, within AO356_11735 at 2658.394 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.356 kb on + strand at 2660.357 kb on - strand at 2660.366 kb on - strand at 2660.399 kb on + strand at 2660.400 kb on - strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.813 kb on - strand, within AO356_11745 at 2660.813 kb on - strand, within AO356_11745 at 2661.065 kb on + strand at 2661.065 kb on + strand at 2661.098 kb on + strand at 2661.172 kb on + strand at 2661.173 kb on - strand at 2661.173 kb on - strand at 2661.248 kb on + strand, within AO356_11750 at 2661.249 kb on - strand, within AO356_11750 at 2661.292 kb on - strand, within AO356_11750
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 2,657,479 + +0.5 2,657,479 + +0.4 2,657,528 + -0.0 2,657,528 + +1.5 2,657,528 + +0.5 2,657,529 - +0.5 2,657,529 - +0.7 2,657,529 - +0.7 2,657,529 - +0.2 2,657,535 + -1.4 2,657,535 + -0.7 2,657,535 + -0.3 2,657,536 - -0.0 2,657,544 - -0.7 2,657,544 - -0.3 2,657,544 - +0.3 2,657,702 + -1.0 2,657,702 + -0.3 2,657,798 + AO356_11735 0.14 -1.2 2,657,916 + AO356_11735 0.29 +1.3 2,657,916 + AO356_11735 0.29 +0.0 2,658,230 + AO356_11735 0.70 +0.3 2,658,394 + +0.0 2,660,333 + -0.4 2,660,333 + -1.0 2,660,333 + +0.0 2,660,333 + -0.2 2,660,333 + +0.1 2,660,333 + +1.1 2,660,333 + -0.4 2,660,333 + +0.6 2,660,334 - -0.2 2,660,334 - +0.4 2,660,334 - +0.5 2,660,334 - +0.0 2,660,334 - -1.4 2,660,334 - +0.3 2,660,334 - +0.2 2,660,334 - +0.0 2,660,334 - -0.2 2,660,334 - -0.4 2,660,334 - +0.5 2,660,334 - +0.1 2,660,334 - +1.2 2,660,337 + -2.5 2,660,337 + -1.4 2,660,337 + -0.7 2,660,338 - -0.1 2,660,338 - +0.7 2,660,338 - +0.6 2,660,338 - -0.1 2,660,356 + -0.3 2,660,357 - +0.3 2,660,366 - -0.6 2,660,399 + -0.0 2,660,400 - -1.4 2,660,416 + +0.3 2,660,416 + -0.8 2,660,416 + +0.5 2,660,417 - -0.5 2,660,417 - -2.1 2,660,417 - -0.1 2,660,813 - AO356_11745 0.41 -0.4 2,660,813 - AO356_11745 0.41 +0.9 2,661,065 + +1.2 2,661,065 + +0.1 2,661,098 + -0.3 2,661,172 + -0.1 2,661,173 - -0.7 2,661,173 - +1.0 2,661,248 + AO356_11750 0.14 -0.7 2,661,249 - AO356_11750 0.14 -0.7 2,661,292 - AO356_11750 0.17 -0.9
Or see this region's nucleotide sequence