Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03220 and AO356_03225 are separated by 56 nucleotides AO356_03225 and AO356_03230 are separated by 10 nucleotides AO356_03230 and AO356_03235 overlap by 1 nucleotides
AO356_03220: AO356_03220 - hypothetical protein, at 715,516 to 715,809
_03220
AO356_03225: AO356_03225 - esterase, at 715,866 to 716,471
_03225
AO356_03230: AO356_03230 - ABC transporter, at 716,482 to 717,165
_03230
AO356_03235: AO356_03235 - ABC transporter permease, at 717,165 to 719,669
_03235
Position (kb) 716
717
718 Strain fitness (log2 ratio) -2
-1
0
1
2 at 715.517 kb on + strand at 715.517 kb on + strand at 715.518 kb on - strand at 715.518 kb on - strand at 715.856 kb on + strand at 715.881 kb on + strand at 716.029 kb on + strand, within AO356_03225 at 716.029 kb on + strand, within AO356_03225 at 716.029 kb on + strand, within AO356_03225 at 716.030 kb on - strand, within AO356_03225 at 716.053 kb on + strand, within AO356_03225 at 716.054 kb on - strand, within AO356_03225 at 716.065 kb on + strand, within AO356_03225 at 716.066 kb on - strand, within AO356_03225 at 716.381 kb on + strand, within AO356_03225 at 716.381 kb on + strand, within AO356_03225 at 716.381 kb on + strand, within AO356_03225 at 716.381 kb on + strand, within AO356_03225 at 716.382 kb on - strand, within AO356_03225 at 716.382 kb on - strand, within AO356_03225 at 716.382 kb on - strand, within AO356_03225 at 716.384 kb on + strand, within AO356_03225 at 716.385 kb on - strand, within AO356_03225 at 716.385 kb on - strand, within AO356_03225 at 716.515 kb on - strand at 717.297 kb on + strand at 717.297 kb on + strand at 717.297 kb on + strand at 717.513 kb on + strand, within AO356_03235 at 717.513 kb on + strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.514 kb on - strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.693 kb on + strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.694 kb on - strand, within AO356_03235 at 717.720 kb on + strand, within AO356_03235 at 717.802 kb on - strand, within AO356_03235 at 717.843 kb on + strand, within AO356_03235 at 717.844 kb on - strand, within AO356_03235
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 715,517 + +0.7 715,517 + +0.6 715,518 - +0.5 715,518 - +0.9 715,856 + +0.1 715,881 + +1.5 716,029 + AO356_03225 0.27 +0.1 716,029 + AO356_03225 0.27 -0.5 716,029 + AO356_03225 0.27 +1.1 716,030 - AO356_03225 0.27 +0.6 716,053 + AO356_03225 0.31 +0.6 716,054 - AO356_03225 0.31 +0.8 716,065 + AO356_03225 0.33 +0.5 716,066 - AO356_03225 0.33 +0.6 716,381 + AO356_03225 0.85 +0.5 716,381 + AO356_03225 0.85 +0.6 716,381 + AO356_03225 0.85 +1.3 716,381 + AO356_03225 0.85 -0.2 716,382 - AO356_03225 0.85 +0.6 716,382 - AO356_03225 0.85 +0.3 716,382 - AO356_03225 0.85 +0.9 716,384 + AO356_03225 0.85 +1.0 716,385 - AO356_03225 0.86 +0.7 716,385 - AO356_03225 0.86 +1.2 716,515 - +1.0 717,297 + +0.2 717,297 + -0.2 717,297 + +0.5 717,513 + AO356_03235 0.14 -0.2 717,513 + AO356_03235 0.14 -2.2 717,514 - AO356_03235 0.14 +0.9 717,514 - AO356_03235 0.14 +0.3 717,514 - AO356_03235 0.14 +0.0 717,514 - AO356_03235 0.14 +0.3 717,514 - AO356_03235 0.14 -0.6 717,514 - AO356_03235 0.14 +0.0 717,693 + AO356_03235 0.21 +1.3 717,693 + AO356_03235 0.21 +0.7 717,693 + AO356_03235 0.21 +0.1 717,693 + AO356_03235 0.21 +0.5 717,693 + AO356_03235 0.21 -0.5 717,693 + AO356_03235 0.21 +1.0 717,693 + AO356_03235 0.21 +0.6 717,693 + AO356_03235 0.21 -0.3 717,694 - AO356_03235 0.21 -0.4 717,694 - AO356_03235 0.21 +0.4 717,694 - AO356_03235 0.21 -0.1 717,694 - AO356_03235 0.21 -0.3 717,694 - AO356_03235 0.21 +1.8 717,694 - AO356_03235 0.21 +1.1 717,694 - AO356_03235 0.21 +0.9 717,694 - AO356_03235 0.21 -0.7 717,720 + AO356_03235 0.22 +0.6 717,802 - AO356_03235 0.25 +0.9 717,843 + AO356_03235 0.27 +0.6 717,844 - AO356_03235 0.27 -0.4
Or see this region's nucleotide sequence