Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02190 and AO356_02195 are separated by 201 nucleotides AO356_02195 and AO356_02200 are separated by 109 nucleotides AO356_02200 and AO356_02205 are separated by 184 nucleotides
AO356_02190: AO356_02190 - hypothetical protein, at 471,421 to 472,110
_02190
AO356_02195: AO356_02195 - phosphatase, at 472,312 to 472,932
_02195
AO356_02200: AO356_02200 - chromosome partitioning protein ParA, at 473,042 to 473,305
_02200
AO356_02205: AO356_02205 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 473,490 to 474,320
_02205
Position (kb) 473
474 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 472.090 kb on + strand at 472.090 kb on + strand at 472.161 kb on - strand at 472.161 kb on - strand at 472.169 kb on + strand at 472.170 kb on - strand at 472.172 kb on + strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.173 kb on - strand at 472.175 kb on - strand at 472.175 kb on - strand at 472.175 kb on - strand at 472.175 kb on - strand at 472.221 kb on - strand at 472.283 kb on - strand at 472.294 kb on + strand at 472.294 kb on + strand at 472.361 kb on + strand at 472.491 kb on + strand, within AO356_02195 at 472.595 kb on - strand, within AO356_02195 at 472.718 kb on + strand, within AO356_02195 at 472.718 kb on + strand, within AO356_02195 at 472.719 kb on - strand, within AO356_02195 at 472.915 kb on - strand at 472.915 kb on - strand at 472.965 kb on - strand at 472.965 kb on - strand at 472.965 kb on - strand at 472.970 kb on + strand at 472.970 kb on + strand at 473.021 kb on - strand at 473.027 kb on - strand at 473.035 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.331 kb on + strand at 473.332 kb on - strand at 473.332 kb on - strand at 473.332 kb on - strand at 473.335 kb on + strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.336 kb on - strand at 473.348 kb on + strand at 473.349 kb on - strand at 473.407 kb on + strand at 473.407 kb on + strand at 473.408 kb on - strand at 473.408 kb on - strand at 473.408 kb on - strand at 473.491 kb on + strand at 473.491 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.571 kb on + strand at 473.572 kb on - strand at 473.572 kb on - strand at 473.572 kb on - strand at 473.584 kb on + strand, within AO356_02205 at 473.584 kb on + strand, within AO356_02205 at 473.686 kb on + strand, within AO356_02205 at 473.687 kb on - strand, within AO356_02205 at 473.687 kb on - strand, within AO356_02205 at 473.857 kb on + strand, within AO356_02205 at 474.262 kb on + strand at 474.263 kb on - strand at 474.263 kb on - strand at 474.275 kb on - strand at 474.275 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 472,090 + -1.8 472,090 + -0.4 472,161 - -0.5 472,161 - +0.1 472,169 + -0.5 472,170 - -0.5 472,172 + -3.7 472,173 - +0.1 472,173 - -1.0 472,173 - -0.8 472,173 - +0.3 472,173 - -0.1 472,173 - -0.4 472,173 - +1.0 472,175 - +0.1 472,175 - +0.8 472,175 - -1.1 472,175 - +0.4 472,221 - +0.3 472,283 - -0.3 472,294 + +0.2 472,294 + +0.3 472,361 + -0.3 472,491 + AO356_02195 0.29 +0.2 472,595 - AO356_02195 0.46 +0.6 472,718 + AO356_02195 0.65 -0.0 472,718 + AO356_02195 0.65 -0.8 472,719 - AO356_02195 0.66 -0.0 472,915 - +0.8 472,915 - +0.3 472,965 - -0.8 472,965 - -0.4 472,965 - -0.3 472,970 + -0.5 472,970 + +1.0 473,021 - -0.5 473,027 - +0.4 473,035 + +0.2 473,331 + -0.5 473,331 + -0.2 473,331 + +0.9 473,331 + +0.3 473,332 - +0.3 473,332 - +0.4 473,332 - +0.6 473,335 + +1.0 473,336 - +0.7 473,336 - -0.2 473,336 - +0.6 473,336 - -1.1 473,348 + -0.7 473,349 - -0.2 473,407 + -1.8 473,407 + -0.5 473,408 - +0.6 473,408 - +0.8 473,408 - +0.2 473,491 + -1.8 473,491 + -0.8 473,571 + -0.8 473,571 + -1.8 473,571 + -1.2 473,571 + +0.2 473,572 - +0.1 473,572 - -0.3 473,572 - -0.6 473,584 + AO356_02205 0.11 -0.6 473,584 + AO356_02205 0.11 -0.3 473,686 + AO356_02205 0.24 -0.2 473,687 - AO356_02205 0.24 -0.2 473,687 - AO356_02205 0.24 -1.0 473,857 + AO356_02205 0.44 +0.9 474,262 + +0.0 474,263 - -1.0 474,263 - +0.2 474,275 - -0.6 474,275 - -0.4
Or see this region's nucleotide sequence