Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00325 and AO356_00330 are separated by 1 nucleotides
AO356_00325: AO356_00325 - RNA helicase, at 60,949 to 63,414
_00325
AO356_00330: AO356_00330 - hypothetical protein, at 63,416 to 64,216
_00330
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1 at 62.420 kb on + strand, within AO356_00325 at 62.420 kb on + strand, within AO356_00325 at 62.420 kb on + strand, within AO356_00325 at 62.462 kb on + strand, within AO356_00325 at 62.462 kb on + strand, within AO356_00325 at 62.462 kb on + strand, within AO356_00325 at 62.463 kb on - strand, within AO356_00325 at 62.463 kb on - strand, within AO356_00325 at 62.496 kb on + strand, within AO356_00325 at 62.511 kb on - strand, within AO356_00325 at 62.511 kb on - strand, within AO356_00325 at 62.531 kb on + strand, within AO356_00325 at 62.531 kb on + strand, within AO356_00325 at 62.531 kb on + strand, within AO356_00325 at 62.531 kb on + strand, within AO356_00325 at 62.532 kb on - strand, within AO356_00325 at 62.532 kb on - strand, within AO356_00325 at 62.600 kb on - strand, within AO356_00325 at 62.637 kb on + strand, within AO356_00325 at 62.638 kb on - strand, within AO356_00325 at 62.728 kb on - strand, within AO356_00325 at 62.816 kb on + strand, within AO356_00325 at 62.816 kb on + strand, within AO356_00325 at 62.816 kb on + strand, within AO356_00325 at 62.901 kb on + strand, within AO356_00325 at 62.901 kb on + strand, within AO356_00325 at 62.902 kb on - strand, within AO356_00325 at 62.902 kb on - strand, within AO356_00325 at 62.902 kb on - strand, within AO356_00325 at 62.902 kb on - strand, within AO356_00325 at 62.971 kb on - strand, within AO356_00325 at 63.006 kb on + strand, within AO356_00325 at 63.006 kb on + strand, within AO356_00325 at 63.006 kb on + strand, within AO356_00325 at 63.006 kb on + strand, within AO356_00325 at 63.006 kb on + strand, within AO356_00325 at 63.007 kb on - strand, within AO356_00325 at 63.007 kb on - strand, within AO356_00325 at 63.089 kb on + strand, within AO356_00325 at 63.090 kb on - strand, within AO356_00325 at 63.090 kb on - strand, within AO356_00325 at 63.147 kb on - strand, within AO356_00325 at 63.158 kb on - strand, within AO356_00325 at 63.193 kb on + strand at 63.193 kb on + strand at 63.194 kb on - strand at 63.200 kb on + strand at 63.213 kb on - strand at 63.233 kb on + strand at 63.286 kb on - strand at 63.363 kb on - strand at 63.399 kb on + strand at 63.399 kb on + strand at 63.418 kb on - strand at 63.418 kb on - strand at 63.418 kb on - strand at 63.513 kb on - strand, within AO356_00330 at 63.541 kb on + strand, within AO356_00330 at 63.541 kb on + strand, within AO356_00330 at 63.679 kb on + strand, within AO356_00330 at 63.679 kb on + strand, within AO356_00330 at 63.680 kb on - strand, within AO356_00330 at 63.680 kb on - strand, within AO356_00330 at 63.680 kb on - strand, within AO356_00330 at 63.680 kb on - strand, within AO356_00330 at 63.680 kb on - strand, within AO356_00330 at 63.877 kb on - strand, within AO356_00330 at 63.877 kb on - strand, within AO356_00330 at 63.877 kb on - strand, within AO356_00330 at 63.878 kb on + strand, within AO356_00330 at 63.879 kb on - strand, within AO356_00330 at 63.879 kb on - strand, within AO356_00330 at 63.879 kb on - strand, within AO356_00330 at 63.919 kb on + strand, within AO356_00330 at 63.998 kb on - strand, within AO356_00330 at 63.998 kb on - strand, within AO356_00330 at 64.030 kb on - strand, within AO356_00330 at 64.065 kb on + strand, within AO356_00330 at 64.066 kb on - strand, within AO356_00330 at 64.066 kb on - strand, within AO356_00330 at 64.071 kb on + strand, within AO356_00330 at 64.071 kb on + strand, within AO356_00330 at 64.071 kb on + strand, within AO356_00330 at 64.145 kb on - strand at 64.145 kb on - strand at 64.182 kb on + strand at 64.182 kb on + strand at 64.182 kb on + strand at 64.190 kb on + strand at 64.191 kb on - strand at 64.217 kb on - strand at 64.235 kb on + strand at 64.235 kb on + strand at 64.235 kb on + strand at 64.236 kb on - strand at 64.335 kb on - strand at 64.335 kb on - strand at 64.382 kb on - strand at 64.420 kb on - strand at 64.420 kb on - strand at 64.420 kb on - strand at 64.420 kb on - strand at 64.460 kb on + strand at 64.464 kb on + strand at 64.479 kb on - strand at 64.479 kb on - strand at 64.505 kb on + strand at 64.506 kb on - strand at 64.506 kb on - strand at 64.517 kb on + strand at 64.518 kb on - strand at 64.518 kb on - strand at 64.518 kb on - strand at 64.589 kb on + strand at 64.590 kb on - strand at 64.590 kb on - strand at 64.597 kb on - strand at 64.711 kb on + strand at 64.711 kb on + strand at 64.712 kb on - strand at 64.712 kb on - strand at 64.712 kb on - strand at 64.740 kb on + strand at 64.741 kb on - strand at 64.755 kb on + strand at 64.755 kb on + strand at 64.756 kb on - strand at 64.756 kb on - strand at 64.816 kb on - strand at 64.816 kb on - strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.830 kb on + strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.831 kb on - strand at 64.836 kb on + strand at 64.837 kb on - strand at 64.837 kb on - strand at 64.837 kb on - strand at 64.843 kb on + strand at 64.844 kb on - strand at 64.844 kb on - strand at 64.949 kb on - strand at 64.989 kb on + strand at 64.989 kb on + strand at 64.989 kb on + strand at 65.008 kb on + strand at 65.009 kb on - strand at 65.023 kb on - strand at 65.048 kb on + strand at 65.048 kb on + strand at 65.048 kb on + strand at 65.049 kb on - strand at 65.049 kb on - strand at 65.137 kb on + strand at 65.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 62,420 + AO356_00325 0.60 +0.9 62,420 + AO356_00325 0.60 -0.3 62,420 + AO356_00325 0.60 +0.4 62,462 + AO356_00325 0.61 +0.1 62,462 + AO356_00325 0.61 -1.0 62,462 + AO356_00325 0.61 +0.5 62,463 - AO356_00325 0.61 +0.3 62,463 - AO356_00325 0.61 -0.0 62,496 + AO356_00325 0.63 +0.1 62,511 - AO356_00325 0.63 +0.2 62,511 - AO356_00325 0.63 +1.2 62,531 + AO356_00325 0.64 -1.0 62,531 + AO356_00325 0.64 +0.5 62,531 + AO356_00325 0.64 -0.2 62,531 + AO356_00325 0.64 +0.3 62,532 - AO356_00325 0.64 +1.0 62,532 - AO356_00325 0.64 +0.9 62,600 - AO356_00325 0.67 -0.5 62,637 + AO356_00325 0.68 -1.1 62,638 - AO356_00325 0.68 -0.2 62,728 - AO356_00325 0.72 +0.4 62,816 + AO356_00325 0.76 -0.2 62,816 + AO356_00325 0.76 +1.0 62,816 + AO356_00325 0.76 +0.5 62,901 + AO356_00325 0.79 -0.5 62,901 + AO356_00325 0.79 +0.2 62,902 - AO356_00325 0.79 +0.7 62,902 - AO356_00325 0.79 -0.1 62,902 - AO356_00325 0.79 +0.1 62,902 - AO356_00325 0.79 -2.1 62,971 - AO356_00325 0.82 +0.9 63,006 + AO356_00325 0.83 +0.3 63,006 + AO356_00325 0.83 +0.1 63,006 + AO356_00325 0.83 -0.9 63,006 + AO356_00325 0.83 -0.9 63,006 + AO356_00325 0.83 +0.5 63,007 - AO356_00325 0.83 -0.2 63,007 - AO356_00325 0.83 +0.4 63,089 + AO356_00325 0.87 -1.1 63,090 - AO356_00325 0.87 +0.5 63,090 - AO356_00325 0.87 -0.3 63,147 - AO356_00325 0.89 +0.4 63,158 - AO356_00325 0.90 +0.9 63,193 + -0.3 63,193 + +0.5 63,194 - +0.2 63,200 + +0.2 63,213 - -0.9 63,233 + -0.3 63,286 - -0.2 63,363 - -0.0 63,399 + -1.6 63,399 + -0.2 63,418 - -0.3 63,418 - +0.3 63,418 - -1.0 63,513 - AO356_00330 0.12 -1.7 63,541 + AO356_00330 0.16 -0.7 63,541 + AO356_00330 0.16 +0.2 63,679 + AO356_00330 0.33 -1.3 63,679 + AO356_00330 0.33 +0.6 63,680 - AO356_00330 0.33 +0.1 63,680 - AO356_00330 0.33 -0.9 63,680 - AO356_00330 0.33 +0.4 63,680 - AO356_00330 0.33 +0.2 63,680 - AO356_00330 0.33 -0.4 63,877 - AO356_00330 0.58 +0.3 63,877 - AO356_00330 0.58 +0.3 63,877 - AO356_00330 0.58 -0.2 63,878 + AO356_00330 0.58 -0.8 63,879 - AO356_00330 0.58 +0.7 63,879 - AO356_00330 0.58 -1.2 63,879 - AO356_00330 0.58 -2.3 63,919 + AO356_00330 0.63 -0.3 63,998 - AO356_00330 0.73 -0.5 63,998 - AO356_00330 0.73 -0.8 64,030 - AO356_00330 0.77 +0.2 64,065 + AO356_00330 0.81 +0.1 64,066 - AO356_00330 0.81 +0.2 64,066 - AO356_00330 0.81 +0.8 64,071 + AO356_00330 0.82 +0.2 64,071 + AO356_00330 0.82 +0.5 64,071 + AO356_00330 0.82 -0.4 64,145 - +0.2 64,145 - +0.1 64,182 + -1.4 64,182 + -0.5 64,182 + -1.7 64,190 + +0.5 64,191 - -0.3 64,217 - +0.5 64,235 + -0.5 64,235 + +0.3 64,235 + +0.2 64,236 - -0.0 64,335 - -1.0 64,335 - +0.3 64,382 - +1.5 64,420 - -1.3 64,420 - -0.1 64,420 - +0.5 64,420 - +0.9 64,460 + +1.0 64,464 + +0.2 64,479 - -1.5 64,479 - -0.3 64,505 + +0.7 64,506 - +0.2 64,506 - -0.1 64,517 + +0.0 64,518 - +0.7 64,518 - +0.1 64,518 - -0.0 64,589 + -1.4 64,590 - -0.3 64,590 - -2.2 64,597 - +1.1 64,711 + -0.1 64,711 + +0.3 64,712 - +0.7 64,712 - -0.1 64,712 - -0.7 64,740 + -0.6 64,741 - +1.1 64,755 + +0.1 64,755 + +0.9 64,756 - +0.5 64,756 - +0.4 64,816 - -0.4 64,816 - -0.1 64,830 + +1.0 64,830 + +0.1 64,830 + +0.8 64,830 + -0.3 64,830 + +0.7 64,830 + -0.8 64,830 + -0.1 64,830 + -0.6 64,831 - -0.2 64,831 - +0.6 64,831 - -0.3 64,831 - -0.2 64,836 + +1.0 64,837 - +0.2 64,837 - -2.1 64,837 - -0.9 64,843 + +0.2 64,844 - +0.5 64,844 - +0.3 64,949 - +0.4 64,989 + +1.0 64,989 + +0.5 64,989 + +0.0 65,008 + +0.6 65,009 - +0.2 65,023 - +0.3 65,048 + -0.2 65,048 + +1.1 65,048 + +0.3 65,049 - -0.2 65,049 - -0.6 65,137 + -0.3 65,150 - +0.2
Or see this region's nucleotide sequence