Strain Fitness in Shewanella loihica PV-4 around Shew_0019

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
20,088	+	fadA	Shew_0018	0.20	+0.3
20,162	+	fadA	Shew_0018	0.26	-0.4
20,297	+	fadA	Shew_0018	0.38	+0.2
20,660	-	fadA	Shew_0018	0.69	-0.1
20,836	-	fadA	Shew_0018	0.84	-0.5
20,916	-				-0.1
20,981	-				-0.3
21,160	-				-0.3
21,160	-				+0.2
21,192	-				+0.1
21,216	-				-0.2
21,369	+	fadB	Shew_0019	0.15	-0.3
21,417	-	fadB	Shew_0019	0.18	-0.1
21,457	+	fadB	Shew_0019	0.19	-0.1
21,544	+	fadB	Shew_0019	0.23	+0.6
21,557	-	fadB	Shew_0019	0.24	-0.7
21,784	-	fadB	Shew_0019	0.35	+0.4
21,855	-	fadB	Shew_0019	0.38	-0.3
21,870	-	fadB	Shew_0019	0.39	+0.0
21,882	-	fadB	Shew_0019	0.39	+0.2
22,031	+	fadB	Shew_0019	0.46	-0.5
22,039	-	fadB	Shew_0019	0.46	+0.6
22,131	-	fadB	Shew_0019	0.51	+0.2
22,131	-	fadB	Shew_0019	0.51	+0.4
22,345	-	fadB	Shew_0019	0.61	+0.1
22,384	+	fadB	Shew_0019	0.63	+0.2
22,452	-	fadB	Shew_0019	0.66	-0.1
22,452	-	fadB	Shew_0019	0.66	-0.1
22,452	-	fadB	Shew_0019	0.66	+1.3
22,707	+	fadB	Shew_0019	0.78	-0.5
22,766	+	fadB	Shew_0019	0.80	+0.1
22,771	+	fadB	Shew_0019	0.81	-0.3
23,389	+				-0.2
23,460	+				-0.2
23,460	+				-0.2
23,468	-				+1.0
23,512	+				+0.1
23,520	-				+0.1
23,552	+				+0.1
23,562	+				-0.0
23,724	+		Shew_0020	0.17	+0.2
23,937	-		Shew_0020	0.33	-0.1
23,986	-		Shew_0020	0.37	-0.0
24,110	+		Shew_0020	0.46	-0.2
24,172	-		Shew_0020	0.51	-0.6
24,177	-		Shew_0020	0.52	-0.2