Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4753
Experiment: BHIS with Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | BHIS with Dimethyl Sulfoxide 10 vol% |
---|---|---|---|---|---|
remove | |||||
6,236,805 | + | BT4752 | 0.60 | +0.2 | |
6,237,062 | - | BT4752 | 0.79 | +1.3 | |
6,237,277 | + | -1.0 | |||
6,237,347 | + | -2.3 | |||
6,237,464 | + | -1.2 | |||
6,237,465 | - | -1.5 | |||
6,237,608 | - | +0.3 | |||
6,237,611 | - | -1.0 | |||
6,237,751 | + | -3.4 | |||
6,237,761 | + | -3.4 | |||
6,237,774 | + | -2.8 | |||
6,237,874 | + | BT4753 | 0.54 | -1.7 | |
6,237,895 | + | BT4753 | 0.63 | -2.4 | |
6,237,961 | + | +0.3 | |||
6,237,990 | - | -0.7 |
Or see this region's nucleotide sequence