Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4082

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
5,325,020	-		BT4081	0.71	-0.5
5,325,024	-		BT4081	0.71	+0.7
5,325,024	-		BT4081	0.71	+0.1
5,325,052	-		BT4081	0.72	-2.6
5,325,061	-		BT4081	0.72	-1.2
5,325,098	-		BT4081	0.73	-1.0
5,325,107	+		BT4081	0.73	-1.6
5,325,195	+		BT4081	0.76	-2.5
5,325,195	+		BT4081	0.76	-0.2
5,325,196	-		BT4081	0.76	+1.8
5,325,230	+		BT4081	0.77	+1.8
5,325,231	-		BT4081	0.77	+0.4
5,325,325	-		BT4081	0.80	+1.6
5,325,338	+		BT4081	0.81	+0.0
5,325,399	-		BT4081	0.83	-0.7
5,325,413	-		BT4081	0.83	-1.4
5,325,481	-		BT4081	0.85	-3.0
5,325,481	-		BT4081	0.85	-3.3
5,325,492	-		BT4081	0.86	-0.7
5,325,561	-		BT4081	0.88	-1.1
5,325,608	-		BT4081	0.89	-1.2
5,325,749	-				+0.9
5,325,771	-				-0.5
5,325,905	-				-0.2
5,325,932	-				-1.9
5,325,941	+				-1.6
5,326,029	-				-2.6
5,326,038	+				+2.4
5,326,039	-				-0.0
5,326,046	+				-0.8
5,326,046	+				+2.6
5,326,219	+		BT4082	0.12	-1.8
5,326,220	-		BT4082	0.12	+1.9
5,326,228	+		BT4082	0.13	-1.7
5,326,229	-		BT4082	0.13	-0.5
5,326,229	-		BT4082	0.13	-3.1
5,326,230	+		BT4082	0.13	+0.5
5,326,231	-		BT4082	0.13	-3.4
5,326,307	-		BT4082	0.17	-1.8
5,326,324	+		BT4082	0.17	-0.9
5,326,349	-		BT4082	0.19	-0.8
5,326,361	-		BT4082	0.19	-2.5
5,326,426	-		BT4082	0.22	-0.9
5,326,433	+		BT4082	0.23	-2.8
5,326,434	-		BT4082	0.23	-0.2
5,326,440	-		BT4082	0.23	+0.4
5,326,480	-		BT4082	0.25	+0.4
5,326,496	-		BT4082	0.26	-1.8
5,326,499	-		BT4082	0.26	-3.2
5,326,520	+		BT4082	0.27	+0.8
5,326,521	-		BT4082	0.27	-2.3
5,326,537	+		BT4082	0.28	-1.0
5,326,537	+		BT4082	0.28	-1.9
5,326,538	-		BT4082	0.28	-2.8
5,326,542	-		BT4082	0.28	-0.2
5,326,627	+		BT4082	0.32	+0.3
5,326,692	+		BT4082	0.35	-1.8
5,326,692	+		BT4082	0.35	+0.2
5,326,694	+		BT4082	0.36	-1.3
5,326,760	+		BT4082	0.39	+0.4
5,326,760	+		BT4082	0.39	-1.4
5,326,846	-		BT4082	0.43	+0.1
5,326,846	-		BT4082	0.43	-0.5
5,326,850	-		BT4082	0.43	-0.3
5,326,850	-		BT4082	0.43	-1.5
5,326,865	-		BT4082	0.44	-1.8
5,326,895	+		BT4082	0.45	+1.1
5,326,900	+		BT4082	0.46	-1.8
5,326,904	+		BT4082	0.46	-1.6
5,326,904	+		BT4082	0.46	+1.4
5,326,904	+		BT4082	0.46	+0.8
5,326,904	+		BT4082	0.46	+1.1
5,326,905	-		BT4082	0.46	-2.3
5,326,905	-		BT4082	0.46	+0.3
5,326,997	+		BT4082	0.50	+0.1
5,327,026	+		BT4082	0.52	-1.7
5,327,050	-		BT4082	0.53	-1.9
5,327,050	-		BT4082	0.53	+0.2
5,327,062	+		BT4082	0.53	+1.8
5,327,144	-		BT4082	0.57	-0.2
5,327,148	+		BT4082	0.58	-1.9
5,327,149	-		BT4082	0.58	-1.5
5,327,149	-		BT4082	0.58	+1.1
5,327,208	-		BT4082	0.61	-1.9
5,327,208	-		BT4082	0.61	-2.2
5,327,209	+		BT4082	0.61	-0.2
5,327,212	-		BT4082	0.61	-0.2
5,327,212	-		BT4082	0.61	+3.0
5,327,222	+		BT4082	0.61	-1.8
5,327,223	-		BT4082	0.61	-1.3
5,327,228	-		BT4082	0.62	+0.4
5,327,228	-		BT4082	0.62	-0.1
5,327,300	+		BT4082	0.65	-1.7
5,327,301	-		BT4082	0.65	-0.2
5,327,302	+		BT4082	0.65	-0.8
5,327,306	-		BT4082	0.65	-1.2
5,327,306	-		BT4082	0.65	+0.3
5,327,333	-		BT4082	0.67	-1.9
5,327,441	-		BT4082	0.72	+0.7
5,327,453	+		BT4082	0.73	-0.4
5,327,460	+		BT4082	0.73	-2.7
5,327,598	+		BT4082	0.80	-1.1
5,327,610	-		BT4082	0.80	-2.9
5,327,610	-		BT4082	0.80	-1.3
5,327,631	-		BT4082	0.81	+0.2
5,327,631	-		BT4082	0.81	+0.4
5,327,631	-		BT4082	0.81	+0.1
5,327,632	+		BT4082	0.81	-1.4
5,327,904	-				+1.4
5,327,943	+				+1.0
5,327,949	+				-0.8
5,327,956	-				-2.4
5,327,972	-				-2.2
5,327,972	-				-1.6
5,328,031	-				+0.5
5,328,143	+		BT4083	0.10	-0.5
5,328,214	+		BT4083	0.17	+0.5
5,328,215	-		BT4083	0.17	-0.8
5,328,321	+		BT4083	0.28	-1.9
5,328,370	-		BT4083	0.32	-0.1
5,328,391	+		BT4083	0.34	-1.8
5,328,437	+		BT4083	0.39	-0.1
5,328,438	-		BT4083	0.39	-0.7
5,328,513	-		BT4083	0.46	-0.9
5,328,538	+		BT4083	0.49	-2.1
5,328,597	-		BT4083	0.55	-1.3
5,328,627	-		BT4083	0.57	-2.3
5,328,632	+		BT4083	0.58	+0.4
5,328,672	+		BT4083	0.62	+1.0
5,328,673	-		BT4083	0.62	-0.5
5,328,673	-		BT4083	0.62	-3.0
5,328,729	-		BT4083	0.67	-2.8
5,328,743	+		BT4083	0.69	+0.4
5,328,743	+		BT4083	0.69	-1.2
5,328,750	-		BT4083	0.69	-1.8
5,328,758	+		BT4083	0.70	+0.4
5,328,861	-		BT4083	0.80	-1.8
5,328,888	-		BT4083	0.83	-2.2
5,328,897	-		BT4083	0.84	+0.4
5,328,902	-		BT4083	0.84	-3.0
5,328,914	+		BT4083	0.85	+0.6
5,328,922	+		BT4083	0.86	-0.4
5,328,927	-		BT4083	0.87	-0.5
5,328,945	+		BT4083	0.88	+0.2
5,328,945	+		BT4083	0.88	+2.0
5,328,948	+		BT4083	0.89	-1.2
5,328,948	+		BT4083	0.89	-1.4
5,328,994	-				-1.2
5,328,994	-				-0.7