Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3143

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
4,007,007	-		BT3141	0.17	-0.7
4,007,007	-		BT3141	0.17	+0.2
4,007,034	-		BT3141	0.23	-0.4
4,007,040	-		BT3141	0.24	+0.5
4,007,040	-				+1.6
4,007,059	+		BT3141	0.28	-3.4
4,007,114	+		BT3141	0.40	-2.7
4,007,197	+		BT3141	0.57	-1.4
4,007,449	+				+0.6
4,007,486	-				-2.4
4,007,567	-				+0.8
4,007,585	-				+0.4
4,007,601	-				+0.6
4,007,601	-				-3.7
4,007,696	-				+1.6
4,007,747	-		BT3142	0.38	-1.3
4,007,749	-				-1.7
4,007,749	-		BT3142	0.38	-3.0
4,007,894	+		BT3142	0.73	+1.2
4,007,895	-		BT3142	0.74	-1.2
4,007,895	-		BT3142	0.74	+1.2
4,007,895	-		BT3142	0.74	+0.6
4,007,896	+		BT3142	0.74	+1.6
4,007,896	+		BT3142	0.74	+0.0
4,007,897	-		BT3142	0.74	-2.2
4,007,897	-		BT3142	0.74	+1.1
4,007,995	-				-1.6
4,008,005	-				-0.4
4,008,005	-				-0.9
4,008,013	+				+1.6
4,008,049	-				-1.9
4,008,149	-		BT3143	0.16	+1.6
4,008,149	-		BT3143	0.16	-1.6
4,008,237	-		BT3143	0.25	-1.7
4,008,237	-		BT3143	0.25	+0.6
4,008,242	-		BT3143	0.25	+0.7
4,008,252	+		BT3143	0.26	+0.6
4,008,253	-		BT3143	0.27	-4.5
4,008,253	-		BT3143	0.27	-0.7
4,008,276	-		BT3143	0.29	-2.9
4,008,337	-		BT3143	0.35	-1.5
4,008,337	-		BT3143	0.35	-1.3
4,008,427	-		BT3143	0.45	-0.1
4,008,439	-		BT3143	0.46	+0.6
4,008,459	-		BT3143	0.48	-1.6
4,008,462	-				+0.6
4,008,476	-		BT3143	0.50	-0.0
4,008,519	-		BT3143	0.55	-0.4
4,008,657	-				-0.0
4,008,657	-		BT3143	0.69	-0.5
4,008,737	-		BT3143	0.77	-2.9
4,008,941	+				-0.7
4,008,985	+				-3.3
4,009,105	+		BT3144	0.14	-0.0
4,009,105	+		BT3144	0.14	-0.7
4,009,106	-		BT3144	0.15	+1.6
4,009,106	-		BT3144	0.15	+0.2
4,009,149	+		BT3144	0.20	-0.0
4,009,185	+		BT3144	0.25	-2.7
4,009,195	+		BT3144	0.27	+0.3
4,009,196	-		BT3144	0.27	-1.2
4,009,274	-		BT3144	0.37	-0.9
4,009,339	+		BT3144	0.46	+1.0
4,009,342	+		BT3144	0.46	+1.5
4,009,359	+		BT3144	0.49	-0.6
4,009,499	+		BT3144	0.68	-3.1
4,009,499	+				+1.6
4,009,499	+		BT3144	0.68	+1.4
4,009,579	+		BT3144	0.78	-1.4
4,009,588	+		BT3144	0.80	-1.7
4,009,589	-		BT3144	0.80	+0.4
4,009,610	-		BT3144	0.83	+0.9
4,009,612	+		BT3144	0.83	-0.4
4,009,644	-		BT3144	0.87	-0.8
4,009,659	+		BT3144	0.89	-1.7
4,009,667	+				+0.6
4,009,737	-				-0.0
4,009,750	-				+1.3
4,009,769	-				+0.4
4,009,769	-				-0.0
4,009,769	-				+0.2
4,009,791	+				-0.3
4,009,791	+				-1.3
4,009,792	-				-3.3
4,009,793	+				-0.2
4,009,794	-				-0.6
4,009,794	-				-3.1
4,009,796	-				-1.6
4,009,809	-				+1.6
4,009,813	-				+1.6
4,009,813	-				-0.5
4,009,813	-				+2.1
4,009,857	-				+0.8
4,009,857	-				+0.1
4,009,859	+				-2.1
4,009,861	+				-2.6
4,009,927	+				+1.4