Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2908

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
3,641,020	-		BT2907	0.30	-0.3
3,641,038	-		BT2907	0.32	+1.5
3,641,063	+		BT2907	0.34	-0.6
3,641,064	-		BT2907	0.34	-0.5
3,641,076	+		BT2907	0.35	-1.9
3,641,079	+		BT2907	0.35	+1.4
3,641,126	-		BT2907	0.38	-0.2
3,641,139	+		BT2907	0.39	-0.0
3,641,140	-		BT2907	0.39	+0.9
3,641,140	-		BT2907	0.39	-1.5
3,641,235	+		BT2907	0.46	+2.5
3,641,235	+		BT2907	0.46	-0.1
3,641,235	+		BT2907	0.46	+0.3
3,641,240	-		BT2907	0.47	-4.2
3,641,267	+		BT2907	0.49	-0.1
3,641,331	+		BT2907	0.53	-1.9
3,641,361	-		BT2907	0.56	+1.1
3,641,368	-		BT2907	0.56	+1.0
3,641,369	+		BT2907	0.56	+1.2
3,641,370	-		BT2907	0.56	-1.1
3,641,398	+		BT2907	0.58	-0.3
3,641,398	+		BT2907	0.58	-0.4
3,641,399	-		BT2907	0.58	-1.9
3,641,424	+		BT2907	0.60	+0.7
3,641,425	-		BT2907	0.60	-1.3
3,641,503	-		BT2907	0.66	+0.5
3,641,505	+		BT2907	0.66	-0.6
3,641,506	-		BT2907	0.66	+0.2
3,641,508	-		BT2907	0.66	-1.5
3,641,508	-		BT2907	0.66	+0.9
3,641,563	-		BT2907	0.70	+1.5
3,641,565	-		BT2907	0.71	-2.3
3,641,619	+		BT2907	0.75	-0.8
3,641,667	+		BT2907	0.78	-1.4
3,641,690	+		BT2907	0.80	+1.1
3,641,721	-		BT2907	0.82	+1.8
3,641,779	-		BT2907	0.86	-2.6
3,641,786	-		BT2907	0.87	-1.3
3,641,797	+		BT2907	0.88	-1.0
3,641,923	-				+1.6
3,641,968	-				+0.8
3,641,973	-				-1.6
3,642,062	-				-1.4
3,642,063	+				+0.1
3,642,114	+				-2.2
3,642,148	-				-0.5
3,642,171	+				+0.9
3,642,174	-				-0.8
3,642,184	-				-2.4
3,642,252	-				+1.5
3,642,269	+				+0.4
3,642,343	+		BT2908	0.13	-4.3
3,642,385	+		BT2908	0.14	+0.5
3,642,405	+		BT2908	0.15	+0.1
3,642,405	+		BT2908	0.15	+1.5
3,642,408	+		BT2908	0.15	+0.1
3,642,408	+		BT2908	0.15	-1.8
3,642,441	+		BT2908	0.17	+0.5
3,642,441	+		BT2908	0.17	+0.3
3,642,460	+		BT2908	0.17	+0.4
3,642,461	-		BT2908	0.17	+1.4
3,642,534	+		BT2908	0.20	+0.3
3,642,664	-		BT2908	0.25	+0.5
3,642,705	-		BT2908	0.27	-0.1
3,642,711	+		BT2908	0.27	-1.9
3,642,779	+		BT2908	0.30	-1.1
3,642,780	-		BT2908	0.30	-0.2
3,642,789	+		BT2908	0.30	-2.1
3,642,807	+		BT2908	0.31	+1.0
3,642,830	-		BT2908	0.32	-0.8
3,642,839	+		BT2908	0.32	-1.6
3,642,846	+		BT2908	0.32	+0.5
3,642,902	+		BT2908	0.35	+1.4
3,642,902	+		BT2908	0.35	-3.1
3,642,902	+		BT2908	0.35	-1.6
3,642,909	+		BT2908	0.35	+3.6
3,642,947	+		BT2908	0.36	-0.5
3,642,951	+		BT2908	0.37	+0.2
3,642,979	+		BT2908	0.38	-2.6
3,643,010	+		BT2908	0.39	+1.2
3,643,011	-		BT2908	0.39	+1.6
3,643,098	+		BT2908	0.42	+1.5
3,643,213	-		BT2908	0.47	-2.3
3,643,243	+		BT2908	0.48	-3.2
3,643,254	+				+1.5
3,643,254	+		BT2908	0.48	-2.1
3,643,265	+		BT2908	0.49	-2.4
3,643,282	-		BT2908	0.50	+2.3
3,643,347	-		BT2908	0.52	-3.2
3,643,372	+		BT2908	0.53	-3.0
3,643,372	+		BT2908	0.53	-3.3
3,643,381	+		BT2908	0.53	+1.3
3,643,381	+		BT2908	0.53	+1.5
3,643,387	-		BT2908	0.54	-3.4
3,643,431	-		BT2908	0.55	-3.3
3,643,508	-		BT2908	0.58	+0.4
3,643,508	-		BT2908	0.58	-1.3
3,643,527	+		BT2908	0.59	-2.9
3,643,591	-		BT2908	0.62	+0.8
3,643,659	-		BT2908	0.64	+0.3
3,643,710	+		BT2908	0.66	-0.6
3,643,710	+		BT2908	0.66	+2.0
3,643,711	-		BT2908	0.66	-0.1
3,643,788	+		BT2908	0.69	+0.0
3,644,008	-		BT2908	0.78	-1.6
3,644,010	+		BT2908	0.78	-1.1
3,644,010	+		BT2908	0.78	+0.4
3,644,011	-		BT2908	0.78	+1.6
3,644,013	+		BT2908	0.78	+0.1
3,644,021	-		BT2908	0.79	-1.3
3,644,076	+		BT2908	0.81	+0.7
3,644,116	-		BT2908	0.82	+2.3
3,644,194	+		BT2908	0.85	-0.5
3,644,194	+		BT2908	0.85	-0.4
3,644,205	+		BT2908	0.86	+0.1
3,644,206	-		BT2908	0.86	+2.3
3,644,254	+		BT2908	0.88	-3.1
3,644,254	+		BT2908	0.88	+0.3
3,644,270	-		BT2908	0.88	+0.5
3,644,275	-		BT2908	0.89	-2.5
3,644,275	-		BT2908	0.89	+0.5
3,644,288	-		BT2908	0.89	-3.5
3,644,366	-				-0.8
3,644,366	-				+0.9
3,644,369	+				+0.9
3,644,369	+				-2.6
3,644,370	-				+0.5
3,644,390	+				+0.2
3,644,391	-				-3.2
3,644,394	+				+1.9
3,644,395	-				+0.1
3,644,401	-				+1.5
3,644,438	+				-3.3
3,644,451	-				-2.0
3,644,458	-				-2.5
3,644,462	+				-1.6
3,644,462	+				+1.1
3,644,463	-				-1.3
3,644,466	+				-0.5
3,644,466	+				+2.2
3,644,466	+				+1.2
3,644,509	-				+0.3
3,644,585	+				-0.7
3,644,594	-				+0.5
3,644,596	+				+1.5
3,644,646	+				+1.1
3,644,646	+				-0.9
3,644,688	+				-2.5
3,644,739	+		BT2909	0.11	-2.1
3,644,745	+		BT2909	0.11	-1.8
3,644,773	+		BT2909	0.13	-2.2
3,644,897	+		BT2909	0.22	+2.1
3,644,899	+		BT2909	0.22	+0.8
3,644,900	-		BT2909	0.22	+0.4
3,644,965	+		BT2909	0.27	-2.4
3,644,971	+		BT2909	0.27	-2.2
3,644,999	+		BT2909	0.29	-3.2
3,645,029	-		BT2909	0.31	+1.5
3,645,039	+		BT2909	0.32	-1.6
3,645,039	+		BT2909	0.32	-2.4
3,645,040	-		BT2909	0.32	-2.2
3,645,112	-		BT2909	0.37	-1.1
3,645,114	+		BT2909	0.37	-1.7
3,645,124	-		BT2909	0.38	-0.6
3,645,133	+		BT2909	0.39	-0.7
3,645,170	+		BT2909	0.41	-0.3
3,645,170	+		BT2909	0.41	-1.1
3,645,170	+		BT2909	0.41	-2.9
3,645,247	+		BT2909	0.47	-0.8
3,645,291	-		BT2909	0.50	-0.1
3,645,327	+		BT2909	0.52	-1.1
3,645,373	+		BT2909	0.55	-0.6
3,645,373	+		BT2909	0.55	+0.3
3,645,414	+		BT2909	0.58	-2.1
3,645,416	+		BT2909	0.58	+0.2
3,645,418	+		BT2909	0.59	-0.5
3,645,419	-		BT2909	0.59	+0.1
3,645,424	+		BT2909	0.59	-0.3
3,645,424	+		BT2909	0.59	+1.5
3,645,429	+		BT2909	0.59	-3.7
3,645,440	+		BT2909	0.60	-0.1
3,645,479	+		BT2909	0.63	+0.8
3,645,479	+		BT2909	0.63	-0.9
3,645,480	-		BT2909	0.63	+3.1
3,645,511	+		BT2909	0.65	-4.1
3,645,528	-		BT2909	0.66	-2.1
3,645,553	-		BT2909	0.68	-0.8
3,645,556	-		BT2909	0.68	-0.5