Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2775

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
3,437,950	+				+0.4
3,437,954	-				-1.0
3,437,990	+				+0.4
3,438,040	+				-2.4
3,438,040	+				+1.5
3,438,101	+				+1.5
3,438,101	+				-0.3
3,438,115	+				-0.9
3,438,121	+				-2.7
3,438,121	+				-0.3
3,438,133	+				+1.2
3,438,162	-				+2.5
3,438,176	+				-0.3
3,438,176	+				-2.3
3,438,220	+				-0.2
3,438,220	+				-0.9
3,438,220	+				-2.7
3,438,221	-				+0.5
3,438,246	-				-0.4
3,438,276	+				-0.7
3,438,276	+				-0.9
3,438,295	+				+0.7
3,438,296	-				-1.1
3,438,462	+				-0.8
3,438,469	+				+1.2
3,438,469	+				+1.7
3,438,469	+				-1.3
3,438,499	+				-2.2
3,438,499	+				-2.1
3,438,503	+				-0.1
3,438,521	+				+0.1
3,438,522	-				-1.1
3,438,525	+				-2.6
3,438,526	-				-2.7
3,438,684	+				+0.1
3,438,709	+				-1.6
3,438,759	+				-1.5
3,438,777	-				-0.3
3,438,777	-				-1.3
3,438,800	+				-0.1
3,438,837	-				-0.8
3,438,853	+				-1.4
3,438,853	+				-1.0
3,438,854	-				+0.7
3,438,913	+				+1.2
3,438,997	+				-2.0
3,438,998	-				+1.5
3,439,010	-				+0.1
3,439,066	+				-2.4
3,439,067	-				-0.5
3,439,067	-				+0.5
3,439,067	-				-1.3
3,439,067	-				-0.4
3,439,067	-				+0.2
3,439,173	+		BT2775	0.11	-0.0
3,439,186	+		BT2775	0.12	-2.6
3,439,186	+		BT2775	0.12	-0.7
3,439,192	+		BT2775	0.12	+0.1
3,439,386	-		BT2775	0.21	-0.1
3,439,386	-		BT2775	0.21	-0.6
3,439,402	+		BT2775	0.22	-2.0
3,439,404	+		BT2775	0.22	-2.0
3,439,412	+		BT2775	0.22	-1.3
3,439,412	+		BT2775	0.22	+1.2
3,439,412	+		BT2775	0.22	+0.3
3,439,412	+		BT2775	0.22	-0.8
3,439,413	-		BT2775	0.22	+0.4
3,439,414	+		BT2775	0.23	-2.1
3,439,414	+		BT2775	0.23	-0.2
3,439,451	-		BT2775	0.24	-0.3
3,439,473	+		BT2775	0.25	-0.8
3,439,473	+		BT2775	0.25	-0.4
3,439,474	-		BT2775	0.25	-0.1
3,439,474	-		BT2775	0.25	-0.2
3,439,511	+		BT2775	0.27	-1.4
3,439,512	-		BT2775	0.27	+0.2
3,439,512	-		BT2775	0.27	-0.3
3,439,515	+		BT2775	0.27	+0.9
3,439,515	+		BT2775	0.27	+1.9
3,439,515	+		BT2775	0.27	-2.6
3,439,516	-		BT2775	0.27	+0.2
3,439,518	-		BT2775	0.27	+0.3
3,439,693	+		BT2775	0.36	-0.8
3,439,693	+		BT2775	0.36	+2.5
3,439,694	-		BT2775	0.36	-2.7
3,439,695	+		BT2775	0.36	-1.3
3,439,696	-		BT2775	0.36	-2.8
3,439,738	+		BT2775	0.38	-0.0
3,439,804	+		BT2775	0.41	-0.5
3,439,804	+		BT2775	0.41	+2.5
3,439,804	+		BT2775	0.41	-1.7
3,439,805	-		BT2775	0.41	-3.6
3,439,805	-		BT2775	0.41	-0.3
3,439,805	-		BT2775	0.41	-2.3
3,439,805	-		BT2775	0.41	+0.3
3,439,807	-		BT2775	0.41	+0.5
3,439,808	+		BT2775	0.41	-2.1
3,439,852	+		BT2775	0.43	-2.2
3,439,853	-		BT2775	0.43	+0.7
3,439,853	-		BT2775	0.43	-2.7
3,439,854	+		BT2775	0.43	+0.4
3,439,931	+		BT2775	0.47	-1.3
3,439,961	+		BT2775	0.48	-1.7
3,439,962	-		BT2775	0.49	-2.2
3,439,962	-		BT2775	0.49	-1.1
3,440,045	+		BT2775	0.52	-2.4
3,440,046	-		BT2775	0.52	+0.7
3,440,104	-		BT2775	0.55	-0.8
3,440,167	+		BT2775	0.58	+0.5
3,440,168	-		BT2775	0.58	+1.3
3,440,200	+		BT2775	0.60	-3.7
3,440,264	+		BT2775	0.63	+0.8
3,440,265	-		BT2775	0.63	+1.3
3,440,265	-		BT2775	0.63	-0.3
3,440,315	-		BT2775	0.65	+1.8
3,440,391	+		BT2775	0.69	+0.9
3,440,517	-		BT2775	0.75	-1.5
3,440,558	+		BT2775	0.77	+0.3
3,440,649	+				+1.5
3,440,652	-		BT2775	0.81	+0.1
3,440,698	-		BT2775	0.83	+0.4
3,440,732	-		BT2775	0.85	-1.7
3,440,733	+		BT2775	0.85	-1.1
3,440,733	+		BT2775	0.85	-0.2
3,440,734	-		BT2775	0.85	-0.3
3,440,853	-				+0.1
3,440,915	+				+1.5
3,440,916	-				-0.1
3,440,917	-				+0.6
3,440,965	+				-0.5
3,441,005	+				+1.5
3,441,049	+				-3.4
3,441,050	-				-0.8
3,441,051	+				+0.2
3,441,052	-				-1.0
3,441,131	+				-2.3
3,441,222	-				+2.2
3,441,230	+				+0.3
3,441,230	+				-1.9
3,441,231	-				-0.7
3,441,254	+				-3.1
3,441,365	-		BT2776	0.17	+0.0
3,441,365	-		BT2776	0.17	+0.7
3,441,368	+		BT2776	0.17	-3.1
3,441,368	+		BT2776	0.17	+1.0
3,441,368	+		BT2776	0.17	+0.8
3,441,391	-		BT2776	0.19	-1.3
3,441,439	-		BT2776	0.23	-3.8
3,441,439	-		BT2776	0.23	+0.4
3,441,495	+		BT2776	0.28	-1.5
3,441,497	+		BT2776	0.28	-1.9
3,441,497	+		BT2776	0.28	-3.2
3,441,504	+		BT2776	0.28	-2.6
3,441,505	-				+1.5
3,441,623	+		BT2776	0.39	+1.5
3,441,624	-		BT2776	0.39	+1.5
3,441,674	+		BT2776	0.43	-0.6
3,441,682	+		BT2776	0.44	+0.5
3,441,683	-		BT2776	0.44	-2.3
3,441,707	+		BT2776	0.46	-0.5
3,441,707	+		BT2776	0.46	+0.3
3,441,752	-		BT2776	0.50	-1.2
3,441,759	-		BT2776	0.50	-0.5
3,441,760	+		BT2776	0.50	+1.1
3,441,761	-		BT2776	0.50	+0.8
3,441,982	-		BT2776	0.69	+0.7
3,442,041	-		BT2776	0.74	-0.2
3,442,046	+		BT2776	0.75	-3.2