Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2574

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
3,211,949	-		BT2573	0.46	+0.5
3,211,955	-		BT2573	0.46	+3.7
3,211,955	-		BT2573	0.46	-3.7
3,211,958	-		BT2573	0.46	-1.8
3,211,958	-		BT2573	0.46	-0.3
3,211,963	-		BT2573	0.47	-0.4
3,211,991	-		BT2573	0.48	+0.6
3,211,995	-		BT2573	0.49	+0.7
3,211,995	-		BT2573	0.49	+1.2
3,212,116	+		BT2573	0.56	+0.3
3,212,117	-		BT2573	0.56	-2.1
3,212,117	-		BT2573	0.56	+0.7
3,212,126	+		BT2573	0.56	-0.3
3,212,126	+		BT2573	0.56	+0.6
3,212,126	+		BT2573	0.56	+1.4
3,212,128	+		BT2573	0.56	+0.3
3,212,128	+		BT2573	0.56	-1.8
3,212,129	-		BT2573	0.56	+0.5
3,212,129	-		BT2573	0.56	+0.3
3,212,285	+		BT2573	0.65	+2.4
3,212,294	-		BT2573	0.66	+0.6
3,212,294	-		BT2573	0.66	+1.0
3,212,294	-		BT2573	0.66	-0.4
3,212,333	+		BT2573	0.68	+0.4
3,212,333	+		BT2573	0.68	-0.5
3,212,335	+		BT2573	0.68	+3.0
3,212,335	+		BT2573	0.68	+0.3
3,212,524	-		BT2573	0.79	+0.9
3,212,546	+		BT2573	0.81	-3.9
3,212,547	-		BT2573	0.81	-3.1
3,212,547	-		BT2573	0.81	+0.4
3,212,571	+		BT2573	0.82	-0.5
3,212,626	+		BT2573	0.85	-1.8
3,212,638	+		BT2573	0.86	+0.3
3,212,729	-				-2.6
3,212,762	-				-1.7
3,212,762	-				-2.6
3,212,849	-				+0.8
3,212,886	+				+0.4
3,212,887	-				-3.2
3,212,893	+				-1.1
3,212,893	+				-1.8
3,212,894	-				-0.9
3,212,894	-				-1.7
3,212,897	+				-0.2
3,212,939	+				-0.9
3,212,940	-				+0.1
3,212,945	+				+2.0
3,212,950	+				-0.2
3,212,950	+				-1.5
3,212,961	-				+1.4
3,213,001	+				-3.2
3,213,026	+				-1.0
3,213,050	-				-0.9
3,213,177	+		BT2574	0.19	-0.6
3,213,177	+		BT2574	0.19	-0.7
3,213,183	+		BT2574	0.19	-2.7
3,213,253	+		BT2574	0.25	-0.0
3,213,272	+		BT2574	0.26	-2.4
3,213,283	+		BT2574	0.27	-2.4
3,213,497	-		BT2574	0.44	-2.5
3,213,508	+		BT2574	0.45	-0.9
3,213,519	+		BT2574	0.46	-0.6
3,213,520	-		BT2574	0.46	-3.6
3,213,520	-		BT2574	0.46	+0.2
3,213,610	+		BT2574	0.53	+0.4
3,213,685	+		BT2574	0.59	-2.8
3,213,709	-		BT2574	0.61	-0.2
3,213,709	-		BT2574	0.61	+0.1
3,213,724	+		BT2574	0.62	-0.2
3,213,750	+		BT2574	0.64	-0.8
3,213,751	-		BT2574	0.64	-0.7
3,213,814	+		BT2574	0.69	+1.7
3,213,863	+		BT2574	0.73	+0.0
3,213,865	+		BT2574	0.73	-3.4
3,213,871	+		BT2574	0.74	-1.4
3,213,871	+		BT2574	0.74	-1.4
3,213,871	+		BT2574	0.74	-2.8
3,213,872	-		BT2574	0.74	-2.7
3,213,875	+		BT2574	0.74	-2.0
3,213,875	+		BT2574	0.74	-2.7
3,213,875	+		BT2574	0.74	-0.2
3,213,876	-		BT2574	0.74	+0.3
3,213,878	-		BT2574	0.74	-1.3
3,213,878	-		BT2574	0.74	-0.1
3,213,890	-		BT2574	0.75	-1.2
3,213,997	+		BT2574	0.84	-2.5
3,213,999	+		BT2574	0.84	+0.5
3,213,999	+		BT2574	0.84	-0.5
3,214,003	-		BT2574	0.84	+0.9
3,214,045	-		BT2574	0.88	-1.9
3,214,067	+		BT2574	0.89	-3.5
3,214,068	-		BT2574	0.89	-1.6
3,214,100	+				-0.6
3,214,101	-				-2.2
3,214,144	+				+0.5
3,214,145	-				+0.2
3,214,145	-				-1.6
3,214,172	+				-1.6
3,214,204	+				-3.3
3,214,204	+				-2.5
3,214,204	+				-0.2
3,214,209	+				-0.6
3,214,210	-				-0.5
3,214,214	+				+2.4
3,214,215	-				-1.1
3,214,279	+				-1.2
3,214,279	+				-3.0
3,214,280	-				-1.0
3,214,354	-				-2.0
3,214,383	-				-0.6
3,214,563	-				+0.4
3,214,652	+				+2.0
3,214,715	+				+0.1
3,214,716	-				-3.1
3,214,769	-		BT2575	0.23	-1.9
3,214,797	+		BT2575	0.36	+0.1
3,214,908	+		BT2575	0.86	-3.0
3,215,006	+				+0.2
3,215,007	-				-2.3
3,215,038	-				+0.1
3,215,100	-		BT2576	0.13	-1.2
3,215,102	+		BT2576	0.14	-0.8
3,215,103	-		BT2576	0.14	+0.3
3,215,139	+		BT2576	0.17	-0.9
3,215,143	+		BT2576	0.17	-0.8
3,215,186	+		BT2576	0.20	-0.0
3,215,186	+		BT2576	0.20	-1.2
3,215,189	-		BT2576	0.21	-2.3