Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2114

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
2,659,788	+		BT2113	0.75	-2.6
2,659,788	+		BT2113	0.75	+1.8
2,659,793	-		BT2113	0.75	-1.2
2,659,801	-		BT2113	0.76	+0.4
2,659,867	+		BT2113	0.78	+0.4
2,659,939	+		BT2113	0.80	-0.7
2,660,004	+		BT2113	0.82	+0.4
2,660,005	-		BT2113	0.82	+1.2
2,660,005	-		BT2113	0.82	+2.4
2,660,005	-		BT2113	0.82	-2.7
2,660,006	+		BT2113	0.82	+2.4
2,660,037	+		BT2113	0.83	+0.4
2,660,037	+		BT2113	0.83	+1.4
2,660,038	-		BT2113	0.83	-1.6
2,660,094	+		BT2113	0.84	-1.6
2,660,129	+		BT2113	0.85	-0.3
2,660,138	+		BT2113	0.85	-1.6
2,660,139	-		BT2113	0.86	-1.2
2,660,158	+		BT2113	0.86	-0.8
2,660,170	+		BT2113	0.86	-1.7
2,660,188	+		BT2113	0.87	+1.8
2,660,205	+		BT2113	0.87	-1.5
2,660,210	-		BT2113	0.88	-0.2
2,660,290	-		BT2113	0.90	+0.8
2,660,326	-				+0.1
2,660,334	-				+0.8
2,660,335	+				+0.0
2,660,335	+				-0.2
2,660,431	-				+0.1
2,660,452	+				-0.2
2,660,453	-				-1.6
2,660,455	-				+1.9
2,660,460	-				-0.0
2,660,477	+				-2.5
2,660,477	+				-0.7
2,660,587	-				-0.0
2,660,614	-				+2.1
2,660,653	+				-2.8
2,660,654	-				-0.2
2,660,729	-				-0.4
2,660,732	-				+0.4
2,660,734	+				+3.4
2,660,778	-				+0.7
2,660,853	-		BT2114	0.13	+1.2
2,660,991	-		BT2114	0.31	+0.4
2,661,056	+		BT2114	0.39	+2.0
2,661,057	-		BT2114	0.39	+0.4
2,661,062	-		BT2114	0.40	-2.9
2,661,124	-		BT2114	0.48	-0.2
2,661,144	+				+1.4
2,661,145	-		BT2114	0.50	-0.6
2,661,267	-				+3.4
2,661,296	+		BT2114	0.70	+0.7
2,661,296	+		BT2114	0.70	-2.1
2,661,297	-		BT2114	0.70	+0.8
2,661,297	-		BT2114	0.70	+1.6
2,661,300	+		BT2114	0.70	-3.7
2,661,301	-		BT2114	0.71	+1.9
2,661,301	-		BT2114	0.71	-0.6
2,661,302	+		BT2114	0.71	-1.1
2,661,303	-		BT2114	0.71	-2.3
2,661,326	-		BT2114	0.74	-0.6
2,661,373	-		BT2114	0.80	+1.6
2,661,550	-				+0.7
2,661,570	+				+0.2
2,661,571	-				-0.4
2,661,576	-				-0.6
2,661,578	+				-1.5
2,661,578	+				-2.0
2,661,585	-				-1.4
2,661,604	-				+2.0
2,661,605	+				-1.7
2,661,608	+				+0.9
2,661,611	-				+0.5
2,661,642	+				+0.6
2,661,668	+				-3.0
2,661,668	+				+1.4
2,661,670	+				-1.5
2,661,693	-				-3.3
2,661,710	+				+0.6
2,661,729	+		BT2115	0.17	-1.1
2,661,730	-		BT2115	0.17	-1.5
2,661,803	-		BT2115	0.52	+0.6
2,661,803	-		BT2115	0.52	-0.2
2,661,858	-		BT2115	0.77	+0.0
2,661,897	-				-2.6
2,661,899	+				-2.1
2,661,904	-				-1.6
2,661,917	+				+0.0
2,661,953	+				-0.5
2,661,960	+				-1.1
2,661,961	-				-0.0
2,661,962	+				-1.8
2,661,963	-				+0.8
2,661,968	+				-1.5
2,661,995	+				-0.2
2,662,076	-		BT2116	0.17	-2.3
2,662,142	+		BT2116	0.29	-2.5
2,662,157	+		BT2116	0.31	-0.8
2,662,195	-		BT2116	0.38	-1.2
2,662,237	+		BT2116	0.46	+0.1
2,662,508	-				-0.2
2,662,508	-				-2.2
2,662,508	-				+0.5
2,662,508	-				-2.9
2,662,521	+				-0.2