Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1292

Experiment: BHIS with Dimethyl Sulfoxide 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 10 vol%
1,608,335	+		BT1291	0.51	-1.6
1,608,434	+		BT1291	0.58	-2.5
1,608,434	+		BT1291	0.58	+0.4
1,608,437	-		BT1291	0.58	-2.1
1,608,444	+		BT1291	0.59	+0.2
1,608,445	-		BT1291	0.59	-0.6
1,608,570	+		BT1291	0.68	-0.5
1,608,724	+		BT1291	0.79	-2.1
1,608,749	+		BT1291	0.81	-0.6
1,608,750	-		BT1291	0.81	-3.3
1,608,973	+				-1.6
1,609,017	+				-0.6
1,609,071	+				-1.0
1,609,077	-				-3.5
1,609,132	-				+0.1
1,609,135	+				-0.6
1,609,180	+				-1.1
1,609,232	+				-2.8
1,609,449	+		BT1292	0.27	-1.8
1,609,516	+		BT1292	0.33	-3.1
1,609,516	+		BT1292	0.33	-2.5
1,609,517	-		BT1292	0.33	+0.0
1,609,517	-		BT1292	0.33	-1.1
1,609,649	-		BT1292	0.45	-1.0
1,609,653	+		BT1292	0.45	-2.5
1,609,653	+		BT1292	0.45	+1.4
1,609,699	-		BT1292	0.49	-0.2
1,609,699	-		BT1292	0.49	-1.0
1,609,726	+		BT1292	0.52	-1.6
1,609,840	-				+1.4
1,609,844	-		BT1292	0.62	-0.4
1,609,846	+		BT1292	0.63	-2.0
1,609,847	-		BT1292	0.63	-2.1
1,609,918	+		BT1292	0.69	+0.4
1,609,978	+		BT1292	0.75	+1.4
1,609,988	+		BT1292	0.75	-1.0
1,609,994	+		BT1292	0.76	-3.0
1,610,086	+		BT1292	0.84	-2.6
1,610,144	+		BT1292	0.90	-0.2
1,610,191	+				-2.7
1,610,195	-				-2.8
1,610,195	-				-1.0
1,610,283	-				-1.3
1,610,480	-				+1.4
1,610,480	-				-3.8
1,610,491	+				-1.2
1,610,546	+				+0.4
1,610,592	-				-1.5
1,610,698	-				+1.9
1,610,763	-				-3.5
1,610,790	+				-2.8
1,610,792	+				-1.1
1,610,797	-				-3.5
1,610,797	-				+1.4
1,610,850	-		BT1293	0.10	-2.1
1,610,853	+		BT1293	0.10	-2.5
1,610,857	-		BT1293	0.10	-1.2
1,610,857	-		BT1293	0.10	-2.1
1,610,857	-		BT1293	0.10	-3.5
1,610,859	+		BT1293	0.10	-1.2
1,610,859	+		BT1293	0.10	-1.5
1,610,861	+		BT1293	0.10	-1.2
1,610,917	+		BT1293	0.13	-2.0
1,611,028	-		BT1293	0.17	-1.8
1,611,039	+		BT1293	0.17	-1.1
1,611,040	-		BT1293	0.17	-1.8
1,611,097	-		BT1293	0.20	-2.7
1,611,097	-		BT1293	0.20	-0.6
1,611,153	-		BT1293	0.22	+0.1
1,611,153	-		BT1293	0.22	-0.5
1,611,184	-		BT1293	0.23	-1.5
1,611,184	-		BT1293	0.23	-1.5
1,611,192	+		BT1293	0.23	-0.2
1,611,193	-		BT1293	0.23	-2.5
1,611,193	-		BT1293	0.23	-1.8
1,611,234	-		BT1293	0.25	-2.6