Experiment: BHIS with Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0609 and BT0610 are separated by 21 nucleotides
BT0609: BT0609 - glycosyltransferase (NCBI ptt file), at 751,630 to 752,769
BT0609
BT0610: BT0610 - lipopolysaccharide biosynthesis protein, putative glycosyltransferase (NCBI ptt file), at 752,791 to 753,981
BT0610
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 751.841 kb on - strand, within BT0609 at 751.847 kb on - strand, within BT0609 at 751.881 kb on + strand, within BT0609 at 751.955 kb on + strand, within BT0609 at 751.995 kb on + strand, within BT0609 at 752.065 kb on - strand, within BT0609 at 752.083 kb on - strand, within BT0609 at 752.151 kb on + strand, within BT0609 at 752.227 kb on + strand, within BT0609 at 752.373 kb on + strand, within BT0609 at 752.659 kb on - strand at 752.671 kb on - strand at 752.755 kb on - strand at 752.920 kb on + strand, within BT0610 at 752.950 kb on - strand, within BT0610 at 752.995 kb on - strand, within BT0610 at 753.070 kb on - strand, within BT0610 at 753.119 kb on + strand, within BT0610 at 753.202 kb on - strand, within BT0610 at 753.268 kb on - strand, within BT0610 at 753.310 kb on - strand, within BT0610 at 753.373 kb on + strand, within BT0610 at 753.418 kb on - strand, within BT0610 at 753.418 kb on - strand, within BT0610 at 753.545 kb on - strand, within BT0610 at 753.583 kb on - strand at 753.609 kb on + strand, within BT0610 at 753.610 kb on - strand, within BT0610 at 753.611 kb on + strand, within BT0610 at 753.611 kb on + strand, within BT0610 at 753.613 kb on + strand, within BT0610 at 753.666 kb on + strand, within BT0610 at 753.698 kb on - strand, within BT0610 at 753.744 kb on - strand, within BT0610 at 753.748 kb on - strand, within BT0610 at 753.751 kb on - strand, within BT0610 at 753.792 kb on + strand, within BT0610 at 753.849 kb on + strand, within BT0610 at 753.860 kb on + strand, within BT0610 at 754.049 kb on - strand at 754.058 kb on - strand at 754.098 kb on - strand at 754.265 kb on - strand at 754.268 kb on - strand at 754.292 kb on - strand at 754.354 kb on - strand at 754.436 kb on + strand at 754.436 kb on + strand at 754.516 kb on - strand at 754.546 kb on - strand at 754.639 kb on - strand at 754.716 kb on - strand at 754.730 kb on + strand at 754.731 kb on - strand at 754.854 kb on - strand at 754.872 kb on - strand at 754.874 kb on - strand at 754.876 kb on - strand at 754.954 kb on - strand at 754.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Dimethyl Sulfoxide 10 vol% remove 751,841 - BT0609 0.19 +1.2 751,847 - BT0609 0.19 -0.1 751,881 + BT0609 0.22 -2.3 751,955 + BT0609 0.29 -1.2 751,995 + BT0609 0.32 +0.3 752,065 - BT0609 0.38 +2.1 752,083 - BT0609 0.40 +2.3 752,151 + BT0609 0.46 +1.0 752,227 + BT0609 0.52 +1.9 752,373 + BT0609 0.65 -2.0 752,659 - +1.7 752,671 - -1.1 752,755 - +2.7 752,920 + BT0610 0.11 -1.3 752,950 - BT0610 0.13 -2.9 752,995 - BT0610 0.17 +2.6 753,070 - BT0610 0.23 -1.7 753,119 + BT0610 0.28 -1.5 753,202 - BT0610 0.35 +1.1 753,268 - BT0610 0.40 +1.9 753,310 - BT0610 0.44 +0.7 753,373 + BT0610 0.49 -1.4 753,418 - BT0610 0.53 +2.3 753,418 - BT0610 0.53 +1.3 753,545 - BT0610 0.63 +1.0 753,583 - +0.1 753,609 + BT0610 0.69 +0.7 753,610 - BT0610 0.69 -0.7 753,611 + BT0610 0.69 +0.7 753,611 + BT0610 0.69 +0.7 753,613 + BT0610 0.69 +0.3 753,666 + BT0610 0.73 -2.5 753,698 - BT0610 0.76 +2.4 753,744 - BT0610 0.80 +1.0 753,748 - BT0610 0.80 +1.3 753,751 - BT0610 0.81 +0.2 753,792 + BT0610 0.84 +1.1 753,849 + BT0610 0.89 -1.5 753,860 + BT0610 0.90 +0.9 754,049 - -0.3 754,058 - -1.3 754,098 - -2.8 754,265 - -0.3 754,268 - +0.2 754,292 - +2.5 754,354 - +1.0 754,436 + -1.7 754,436 + +1.3 754,516 - +0.7 754,546 - -1.6 754,639 - -1.3 754,716 - -2.7 754,730 + +0.3 754,731 - -0.3 754,854 - +0.3 754,872 - -2.3 754,874 - +0.2 754,876 - -1.3 754,954 - +1.2 754,978 - +0.3
Or see this region's nucleotide sequence